Debian Med Typesetting packages

KiNG (Kinemage, Next Generation) is an interactive system for three-dimensional vector graphics. It supports a set of graphics primitives that make it suitable for many types of graphs, plots, and other illustrations; although its first use was to display macromolecular structures for biophysical research. KiNG builds on Mage, JavaMage, and the "kinemage" (kinetic image) concept to deliver a full-featured Java application with a user-friendly interface and integrated editing features. The KiNG jar file can be used within a web page as a Java applet or Java object to promote easy access to kinemages or coordinate files from a web browser.

The biblatex package by Philipp Lehman is becoming the definitive citation management tool for LaTeX users. Biblatex has relied on the venerable BibTeX program only for sorting and generating a very generic .bbl file without any formatting instruction. Everything else is taken care of by biblatex, which provides a powerful and flexible macro interface for authors of citation styles.

Biber offers a large superset of BibTeX functionality for BibLaTeX users. In addition it offers full UTF-8 (Unicode 6.0) capabilities, fully customisable sorting, output to GraphViz to help visualise complex crossrefs, support for remote data sources, structural validation of the data against the (customisable) data model, and a lot more.

Bibus is a bibliographic database which has been developed with LibreOffice/ OpenOffice.org in mind. It can directly insert citations and format the bibliographic index in an open OpenOffice.org Writer document. The main features are

• hierarchical organization of the references with user-defined keys
• designed for multiuser-environments (share databases between users)
• a search engine supporting live queries
• on-line PubMed access
• import of PubMed (Medline), EndNote/Refer, RIS and BibTeX records.

Bibus will use an SQLite-database by default for storage (via the SQLite3 module available in Python >2.5). But it also supports MySQL-databases. If you want to use a MySQL-database, make sure, that you have the python-mysqldb package installed.

Приложение для управления библиографическими базами данных в формате BibTeX. KBibTeX может быть использован как отдельная программа, но может также быть внедрён в другие приложения KDE (например, как библиографический редактор в Kile).

KBibTeX может запрашивать ресурсы в сети (например, Google scholar) через настраиваемый поиск URL, импортировать наборы данных из NCBI Pubmed и поддерживает маркировку текста по ключевыми словам и управление ссылками на локальные файлы.

Файлы BibTeX могут быть экспортированы в форматы HTML, XML, PDF, PS и RTF, используя большое количество стилей цитирования.

qqman is an add-on package for the R statistical environment. This package provides functions for visualizing Genome-Wide Association Studies (GWAS) results using Manhattan plots and Quantile-Quantile plots.