Debian Med Physics packages

BioSig 라이브러리에 기반한, 이 패키지는 아래 명령행 도구를 제공합니다.

• save2gdf: SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF, BDF, CWFB를 포함하지만 이에 국한되지 않고 다양한 파일 형식간 변환.
• biosig2gdf: biosig 데이타 파일을 GDF로 변환하여 스크립팅 언어 (예. loadgdf.{py,r})로 구문 분석 및 로딩을 단순화
• rec2bin, bin2rec, heka2itx, save2aecg, save2scp: save2gdf 기반한 여러 변환 도구
• biosig_fhir: 생체 신호 데이타를 HL7/FFHIR 바이너리 템플릿 파일로 패킹
• physicalunits: ISO 11073-10101에 따른 물리적 유닛의 인코딩 및 디코딩 변환기

GDF (General Datafromat for Biosignals / 생체신호를 위한 일반 데이타형식)은 EEG, ECG, MEG 같은 생체신호를 위한 일반 저장소를 제공하기 위함입니다.

이 패키지는 라이브러리(gdf_merger)와 함께 포함되어 있는 도구를 제공합니다.

Octave is a (mostly MATLAB® compatible) high-level language, primarily intended for numerical computations. It provides a convenient command-line interface for solving linear and nonlinear problems numerically.

Octave can be dynamically extended with user-supplied C++ files.

CERNLIB은 물리 실험에 사용하기 위한 데이타 분석 도구와 라이브러리 집합입니다. 그러나 생물 과학과 같은 다른 분야에 대한 어플리케이션도 있습니다.

PAW는 대화형 그래피컬한 프리젠테이션과 통계 및 수학적 분석 도구를 제공하는 대화형 프로그램입니다. 이 프로그램은 히스토그램, 이벤트 파일 (Ntuples), 벡터등과 같이 물리학자에게 익숙한 오브젝트상에서 작업하도록 설계되었습니다.

이 프로그램은 64 비트용으로 개발되지 않았기 때문에, 64비트 아키텍쳐상에서 적절히 동작할 수 있도록 하기 위해 CERN 라이브러리에 정적 링크 되어 있습니다.

CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package includes Paw++, an interactive program for use in analysis and graphical presentation. Paw++ is the same program as PAW (in the "paw" package), but with a more user-friendly Motif-based GUI, compiled against Lesstif in Debian.

The program is linked statically against the CERN libraries on 64-bit architectures in order to function properly, as its design is not very 64-bit clean.

R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files.

The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme.

The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations.

Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'.

This package is a metapackage which eases the transition from the pre-1.5.0 package setup with its larger r-base package. Once installed, it can be safely removed and apt-get will automatically upgrade its components during future upgrades. Providing this package gives a way to users to then only install r-base-core if they so desire.

BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED .

This package provides header files and static library.

This package provides Octave bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF.

CERNLIB is a suite of data analysis tools and libraries created for use in physics experiments, but also with applications to other fields such as the biological sciences.

This package includes example scripts for use by PAW or Paw++, and test scripts to make sure that the PAW or Paw++ programs behave correctly. You may run the examples and tests with the included paw-demos program.

This package provides Python3 bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF.

Multiple-tau correlation is computed on a logarithmic scale (less data points are computed) and is thus much faster than conventional correlation on a linear scale such as numpy.correlate

An online reference is available at http://paulmueller.github.io/multipletau

GATE incorporates the Geant4 libraries in a modular, versatile, and scripted simulation toolkit which is adapted to the field of nuclear medicine both in PET (Positron Emission Tomography) and SPECT (Single Photon Emission Computer Tomography). It allows the accurate description of time-dependent phenomena such as source or detector movement and source decay kinetics. The ability to synchronize all time-dependent components allows a coherent description of the acquisition process. It makes it possible to perform realistic simulations of data acquisitions in time.

OpenViBE enables to design, test and use Brain-Computer Interfaces (BCI). OpenViBE is a software for real-time neurosciences (that is, for real-time processing of brain signals). It can be used to acquire, filter, process, classify and visualize brain signals in real time.