Summary

Autoremovals: 3

Migration issues: 2

CI failures: 4

Install issues: 0

No issues: 29/41

Debian Med phylogeny packages

This lists Debian packages related to phylogeny for use in life sciences. The purpose of this compilation of packages is to have a handy subset of from the med-bio metapackage which contains a lot more than only phylogeny related software.

beast-mcmc

😟 Autoremoval

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-10-04
Dependencies leading to autoremoval: f2j pocl
Bugs in dependencies leading to autoremoval: #1096604 #1097627

Continuous integration (CI) tests are missing.

iqtree

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-04
Bugs leading to autoremoval: #1096850
Will result in removal of gubbins with total popcon score of 0

mrbayes

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-10-05
Dependencies leading to autoremoval: pocl
Bugs in dependencies leading to autoremoval: #1097627

jmodeltest

😟 Migration

😑 Tests missing

Migration from unstable to testing is blocked:

Not in testing for 178 days.
Verdict: Rejected/violates migration policy/introduces a regression

Continuous integration (CI) tests are missing.

pplacer

😟 Migration

Migration from unstable to testing is blocked:

Not in testing for 988 days.
Verdict: Rejected/violates migration policy/introduces a regression

hmmer

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

muscle

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

proda

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

sigma-align

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

proalign

😑 Tests missing

Continuous integration (CI) tests are missing.

spread-phy

😑 Tests missing

Continuous integration (CI) tests are missing.

treeview

😑 Tests missing

Continuous integration (CI) tests are missing.