Biology development - QA

r-cran-vegan

😟 Autoremoval

😟 CI

😟 Migration

Package marked for automatic removal:

Will be removed on: 2025-04-22
Bugs leading to autoremoval: #1099926
Will result in removal of r-bioc-netsam r-bioc-phyloseq r-cran-adegenet r-cran-adephylo r-cran-gunifrac r-cran-seriation r-cran-treespace with total popcon score of 0

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

Migration from unstable to testing is blocked:

Has been trying to migrate for 59 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

r-bioc-cummerbund

😟 Autoremoval

😟 CI

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-04-25
Dependencies leading to autoremoval: r-cran-fastcluster
Bugs in dependencies leading to autoremoval: #1100292

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 2.6.1-1
Sections: jessie-rcmd

biomaj3

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-05-08
Dependencies leading to autoremoval: uvloop
Bugs in dependencies leading to autoremoval: #1101258

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

pybel

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-05-08
Dependencies leading to autoremoval: uvloop
Bugs in dependencies leading to autoremoval: #1101258

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-ete3

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: lme4 r-cran-testthat
Bugs in dependencies leading to autoremoval: #1099927 #1101386

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-skbio

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: lme4 r-cran-testthat
Bugs in dependencies leading to autoremoval: #1099927 #1101386

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-pybuild

r-bioc-phyloseq

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: r-cran-vegan
Bugs in dependencies leading to autoremoval: #1099926

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-seurat

😟 Autoremoval

😟 CI

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.random
Bugs in dependencies leading to autoremoval: #1099922 #1099924 #1099925

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

libhmsbeagle

😟 Autoremoval

😟 Install/upgrade

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-04-28
Dependencies leading to autoremoval: pocl
Bugs in dependencies leading to autoremoval: #1097326

Piuparts failed:

Version: 2.1.2+20160831-5
Sections: jessie2bpo2stretch jessie-lts2stretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd jessie2Xstretch

Continuous integration (CI) tests are missing.

openms

😟 Autoremoval

😟 Install/upgrade

😑 Tests missing

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: cppcheck
Bugs in dependencies leading to autoremoval: #1099986

Piuparts failed:

Version: None
Sections: jessie2Xstretch jessie2Xstretch-rcmd jessie2stretch-rcmd jessie2stretch jessie-lts2stretch

Continuous integration (CI) tests are missing.

pyfai

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-04-25
Dependencies leading to autoremoval: pocl pyopencl python-xarray uvloop
Bugs in dependencies leading to autoremoval: #1097326 #1100255 #1100293 #1101258

Piuparts failed:

Version: 0.15.0+dfsg1-1~bpo9+1
Sections: stretch2bpo

r-cran-adegenet

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: r-cran-vegan
Bugs in dependencies leading to autoremoval: #1099926

Piuparts failed:

Version: 2.0.1-1~bpo8+1
Sections: jessie2bpo

r-cran-adephylo

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: r-cran-vegan
Bugs in dependencies leading to autoremoval: #1099926

Piuparts failed:

Version: 1.1-10-2~bpo8+1
Sections: jessie2bpo

r-cran-fastcluster

😟 Autoremoval

😟 Install/upgrade

Package marked for automatic removal:

Will be removed on: 2025-04-25
Bugs leading to autoremoval: #1100292
Will result in removal of r-bioc-cummerbund r-bioc-netsam r-cran-maotai r-cran-propclust r-cran-wgcna with total popcon score of 0

Piuparts failed:

Version: 1.1.22-1
Sections: jessie2Xstretch-rcmd

r-bioc-ebseq

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: r-cran-testthat
Bugs in dependencies leading to autoremoval: #1099927

unifrac

😟 Autoremoval

Package marked for automatic removal:

Will be removed on: 2025-04-22
Dependencies leading to autoremoval: lme4 r-cran-testthat
Bugs in dependencies leading to autoremoval: #1099927 #1101386

python-cobra

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 73 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: 0.5.9-1
Sections: jessie2bpo2stretch

python-cogent

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Not in testing for 444 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends, missingbuild
Migrates after: numba

Piuparts failed:

Version: 2024.5.7a1+dfsg-3
Sections: sid

q2cli

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 255 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest, depends
Migrates after: qiime

Piuparts failed:

Version: 2024.5.0-2
Sections: sid-broken-symlinks sid-strict sid-nodoc sid

q2-dada2

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 364 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

Piuparts failed:

Version: 2022.11.2-2
Sections: sid-merged-usr

qiime

😟 CI

😟 Migration

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

Piuparts failed:

Version: None
Sections: jessie-lts2stretch jessie2Xstretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd

bcbio

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Not in testing for 392 days.
Verdict: Rejected/violates migration policy/introduces a regression
Migrates after: mosdepth, r-bioc-degreport, umis

intake

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 367 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: appdirs

libbio-tools-run-alignment-tcoffee-perl

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Migration from unstable to testing is blocked:

Not in testing for 392 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

nim-hts

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 262 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: nim

nim-kexpr

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 262 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: nim

nim-lapper

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 262 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: nim

python-anndata

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 411 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest

python-loompy

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-python

Migration from unstable to testing is blocked:

Not in testing for 444 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: numba

q2-alignment

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-cutadapt

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-demux

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 230 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-emperor

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: qiime
Migrates after: q2-types

q2-feature-classifier

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 398 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-quality-control, q2-taxa, q2-types, qiime

q2-feature-table

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-fragment-insertion

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-phylogeny

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 230 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-alignment, q2-types, qiime

q2-quality-control

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 222 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-taxa, qiime

q2-quality-filter

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-types, qiime

q2-sample-classifier

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: q2-feature-table, q2-types, qiime

q2-taxa

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: qiime
Migrates after: q2-types

q2-types

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Rejected/violates migration policy/introduces a regression
Reason: autopkgtest
Migrates after: qiime

toil

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-pybuild

Migration from unstable to testing is blocked:

Not in testing for 261 days.
Verdict: Rejected/violates migration policy/introduces a regression

libpwiz

😟 Migration

😟 Install/upgrade

😑 Tests missing

Migration from unstable to testing is blocked:

Not in testing for 237 days.
Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

Version: 3.0.9393-1
Sections: jessie-lts2stretch jessie2stretch jessie2Xstretch jessie2stretch-rcmd jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

bio-tradis

😟 CI

😟 Install/upgrade

😑 Tests missing

Continuous integration (CI) tests are failing:

Testsuite:

Piuparts failed:

Version: 1.3.3+dfsg-3~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libchado-perl

😟 CI

😟 Install/upgrade

😑 Tests missing

Continuous integration (CI) tests are failing:

Testsuite:

Piuparts failed:

Version: 1.23-2
Sections: jessie

Continuous integration (CI) tests are missing.

consensuscore

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.0.2-2
Sections: jessie2bpo2stretch

ctdconverter

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.0-4~bpo9+1
Sections: stretch2bpo

gatb-core

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.4.2+dfsg-13
Sections: oldstable222sid

htseq

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 0.6.1p1-4~bpo8+1
Sections: jessie2bpo

htsjdk

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.8.1+dfsg-1
Sections: jessie2bpo2stretch

kineticstools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 0.5.1+20150828+git3aa3d96+dfsg-1~bpo8+1
Sections: jessie2bpo

libace-perl

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

Piuparts failed:

Version: 1.92-4
Sections: jessie-lts2stretch

librcsb-core-wrapper

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.005-4
Sections: jessie-lts2stretch jessie2Xstretch-rcmd jessie2stretch-rcmd jessie2stretch

libsbml

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 5.13.0+dfsg-1
Sections: jessie2stretch jessie2stretch-rcmd jessie2Xstretch jessie2Xstretch-rcmd jessie-lts2stretch

mcl

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1:14-137-1
Sections: jessie jessie-lts2stretch jessie-rcmd jessie2Xstretch jessie2stretch jessie2Xstretch-rcmd jessie2stretch-rcmd

python-biotools

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.2.12-3~bpo9+1
Sections: stretch2bpo

python-freecontact

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

Piuparts failed:

Version: 1.1-2
Sections: jessie2stretch-rcmd jessie2Xstretch-rcmd

python-pbcore

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 1.2.7+dfsg-2~bpo8+1
Sections: jessie2bpo

r-bioc-altcdfenvs

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 2.26.0-1
Sections: jessie-rcmd

r-bioc-biocgenerics

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 0.10.0-1
Sections: jessie jessie-rcmd

r-bioc-genomeinfodb

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 1.0.2-2
Sections: jessie-rcmd jessie

r-cran-nmf

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

Piuparts failed:

Version: 0.20.6-1~bpo8+1
Sections: jessie2bpo

rdkit

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 201603.5-2
Sections: jessie-lts2stretch jessie2Xstretch jessie2stretch-rcmd jessie2Xstretch-rcmd

seqan2

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 2.4.0+dfsg-8~bpo8+1
Sections: jessie2bpo

snakemake

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 3.9.0+dfsg-2~bpo8+1
Sections: jessie2bpo

sra-sdk

😟 CI

😟 Install/upgrade

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

Piuparts failed:

Version: 3.0.9+dfsg-7.1
Sections: oldstable222sid

q2-metadata

😟 Migration

Migration from unstable to testing is blocked:

Not in testing for 219 days.
Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
Reason: build-depends, depends
Invalidated by another package
Blocked by: qiime
Migrates after: q2-quality-filter, q2-types

genomicsdb

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

joypy

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

libbio-db-biofetch-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-db-embl-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-db-ncbihelper-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libbio-tools-run-alignment-clustalw-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

libgoby-java

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

libzerg-perl

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-perl

pyranges

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-airr

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-alignlib

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-bel-resources

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-cgecore

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-cooler

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

python-pangolearn

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

python-parasail

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

r-bioc-annotate

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-annotationdbi

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-annotationhub

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-arrayexpress

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-biobase

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-biomart

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-bsgenome

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-complexheatmap

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-dada2

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-ensembldb

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-geneplotter

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-genomicfeatures

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-geoquery

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-go.db

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-gseabase

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-gviz

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-hypergraph

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-metagenomeseq

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-mofa

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-multiassayexperiment

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-oligoclasses

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-org.hs.eg.db

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-purecn

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-qusage

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-s4vectors

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-structuralvariantannotation

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-bioc-tximport

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

r-cran-phangorn

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest, autopkgtest-pkg-r

r-cran-pscbs

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

r-cran-shazam

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-r

seqan3

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

shasta

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest

unifrac-tools

😟 CI

Continuous integration (CI) tests are failing:

Testsuite: autopkgtest-pkg-python

bambamc

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.0.50-1
Sections: jessie2stretch jessie2Xstretch jessie2stretch-rcmd jessie2Xstretch-rcmd jessie-rcmd jessie-lts2stretch

Continuous integration (CI) tests are missing.

biojava-live

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1:1.7.1-5
Sections: jessie2Xstretch-rcmd jessie2Xstretch jessie2stretch-rcmd jessie2stretch jessie-lts2stretch jessie jessie-rcmd jessie2lts

Continuous integration (CI) tests are missing.

hdf5

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.8.13+docs-15+deb8u1
Sections: jessie-security jessie-rcmd

Continuous integration (CI) tests are missing.

jebl2

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.1+20140614-1
Sections: jessie2stretch-rcmd jessie2Xstretch-rcmd jessie2Xstretch jessie2stretch jessie-lts2stretch

Continuous integration (CI) tests are missing.

libbio-mage-utils-perl

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 20030502.0-2
Sections: jessie-lts2stretch

Continuous integration (CI) tests are missing.

libbioparser-dev

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.2.0-2~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libbpp-core

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-3
Sections: jessie2stretch-rcmd jessie2Xstretch-rcmd jessie2stretch

Continuous integration (CI) tests are missing.

libbpp-phyl

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch

Continuous integration (CI) tests are missing.

libbpp-phyl-omics

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-2
Sections: jessie2stretch-rcmd jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

libbpp-popgen

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch jessie2Xstretch-rcmd jessie2stretch-rcmd jessie2stretch

Continuous integration (CI) tests are missing.

libbpp-qt

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libbpp-raa

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libbpp-seq

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch jessie2stretch jessie-lts2stretch

Continuous integration (CI) tests are missing.

libbpp-seq-omics

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.2.0-1
Sections: jessie2Xstretch

Continuous integration (CI) tests are missing.

libdivsufsort

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.0.1-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libgenome

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.3.1-9
Sections: jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

libmaus2

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.0.813+ds-4
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

libmems

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.6.0+4725-1~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libmuscle

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 3.7+4565-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libpal-java

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.5.1+dfsg-2
Sections: jessie-lts2stretch jessie2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

libpsortb

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.0+dfsg-2~bpo9+1
Sections: stretch2bpo

Continuous integration (CI) tests are missing.

libseqlib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 1.2.0+dfsg-11
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

ncbi-vdb

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 2.8.1+dfsg-2~bpo8+1
Sections: jessie2bpo

Continuous integration (CI) tests are missing.

pbseqlib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 5.3.5+dfsg-9
Sections: oldstable222sid

Continuous integration (CI) tests are missing.

python-cgelib

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.7.3-2
Sections: bookworm-rcmd bookworm

Continuous integration (CI) tests are missing.

sbmltoolbox

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 4.1.0-1
Sections: jessie-rcmd

Continuous integration (CI) tests are missing.

srf

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: 0.1+dfsg-4
Sections: jessie2Xstretch-rcmd jessie-lts2stretch jessie jessie2lts jessie-rcmd jessie2Xstretch jessie2stretch-rcmd

Continuous integration (CI) tests are missing.

ssm

😟 Install/upgrade

😑 Tests missing

Piuparts failed:

Version: None
Sections: jessie2Xstretch jessie2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd

Continuous integration (CI) tests are missing.

bamtools

😟 Install/upgrade

Piuparts failed:

Version: 2.4.1+dfsg-1
Sections: jessie-lts2stretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch jessie2Xstretch-rcmd

bioperl

😟 Install/upgrade

Piuparts failed:

Version: 1.7.1-2
Sections: jessie-lts2stretch

bioperl-run

😟 Install/upgrade

Piuparts failed:

Version: 1.7.1-3
Sections: jessie-lts2stretch

biosquid

😟 Install/upgrade

Piuparts failed:

Version: 1.9g+cvs20050121-7
Sections: jessie-lts2stretch jessie2Xstretch-rcmd jessie2Xstretch jessie2stretch

ctdopts

😟 Install/upgrade

Piuparts failed:

Version: 1.2-3~bpo9+1
Sections: stretch2bpo

cwltool

😟 Install/upgrade

Piuparts failed:

Version: 1.0.20170114120503-1~bpo8+1
Sections: jessie2bpo

fast5

😟 Install/upgrade

Piuparts failed:

Version: 0.6.5-1~bpo9+1
Sections: stretch2bpo

fermi-lite

😟 Install/upgrade

Piuparts failed:

Version: 0.1-4~bpo9+1
Sections: stretch2bpo

ffindex

😟 Install/upgrade

Piuparts failed:

Version: 0.9.9.7-3
Sections: jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd jessie2stretch jessie2Xstretch

freecontact

😟 Install/upgrade

Piuparts failed:

Version: 1.0.21-5
Sections: jessie-lts2stretch jessie2Xstretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd

genometools

😟 Install/upgrade

Piuparts failed:

Version: 1.5.9+ds-4
Sections: jessie2bpo2stretch jessie-lts2stretch jessie2Xstretch jessie2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd

htslib

😟 Install/upgrade

Piuparts failed:

Version: 1.7-2~bpo9+1
Sections: stretch2bpo

kmer

😟 Install/upgrade

Piuparts failed:

Version: 0~20150903+r2013-9
Sections: oldstable22testing

libai-fann-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.10-3
Sections: jessie2Xstretch

libbio-mage-perl

😟 Install/upgrade

Piuparts failed:

Version: 20030502.3-3
Sections: jessie-lts2stretch

libbio-scf-perl

😟 Install/upgrade

Piuparts failed:

Version: 1.03-7
Sections: oldstable222sid

libdisorder

😟 Install/upgrade

Piuparts failed:

Version: 0.0.2-1~bpo8+1
Sections: jessie2bpo

libedlib

😟 Install/upgrade

Piuparts failed:

Version: 1.2.3-3~bpo9+1
Sections: stretch2bpo

libfastahack

😟 Install/upgrade

Piuparts failed:

Version: 0.0+20160702-1~bpo8+1
Sections: jessie2bpo

libgo-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.15-5
Sections: jessie-lts2stretch

libnhgri-blastall-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.66-2
Sections: jessie-lts2stretch jessie2stretch

librostlab

😟 Install/upgrade

Piuparts failed:

Version: 1.0.20-6
Sections: jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd jessie2Xstretch jessie-lts2stretch

librostlab-blast

😟 Install/upgrade

Piuparts failed:

Version: 1.0.1-7
Sections: jessie2Xstretch jessie2stretch jessie2Xstretch-rcmd jessie2stretch-rcmd jessie-lts2stretch

libsmithwaterman

😟 Install/upgrade

Piuparts failed:

Version: 0.0+git20160702.2610e25-4~bpo9+1
Sections: stretch2bpo

libsort-key-top-perl

😟 Install/upgrade

Piuparts failed:

Version: 0.08-1
Sections: jessie2Xstretch

libssw

😟 Install/upgrade

Piuparts failed:

Version: 1.0-3~bpo8+1
Sections: jessie2bpo

libtabixpp

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0-2~bpo8+1
Sections: jessie2bpo

libthread-pool

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0-1~bpo9+1
Sections: stretch2bpo

libvcflib

😟 Install/upgrade

Piuparts failed:

Version: 1.0.0~rc1+dfsg1-6~bpo9+1
Sections: stretch2bpo

libzerg

😟 Install/upgrade

Piuparts failed:

Version: 1.0.7-8
Sections: jessie2stretch jessie2stretch-rcmd jessie2Xstretch jessie2Xstretch-rcmd jessie-lts2stretch

minimap2

😟 Install/upgrade

Piuparts failed:

Version: 2.15+dfsg-1~bpo9+1
Sections: stretch2bpo

ncbi-tools6

😟 Install/upgrade

Piuparts failed:

Version: 6.1.20170106+dfsg1-0+deb9u1
Sections: jessie2bpo2stretch jessie-lts2stretch jessie2stretch jessie2stretch-rcmd jessie2Xstretch jessie2Xstretch-rcmd

pbbam

😟 Install/upgrade

Piuparts failed:

Version: 0.7.4+ds-1~bpo8+1
Sections: jessie2bpo

pybigwig

😟 Install/upgrade

Piuparts failed:

Version: 0.3.23+dfsg-1
Sections: oldstable222sid

python-biopython

😟 Install/upgrade

Piuparts failed:

Version: 1.68+dfsg-3~bpo8+1
Sections: jessie2bpo

python-csb

😟 Install/upgrade

Piuparts failed:

Version: 1.2.3+dfsg-3
Sections: jessie-lts2stretch jessie2stretch-rcmd jessie2stretch jessie2Xstretch-rcmd

python-cutadapt

😟 Install/upgrade

Piuparts failed:

Version: 1.12-2~bpo8+1
Sections: jessie2bpo

python-dendropy

😟 Install/upgrade

Piuparts failed:

Version: 4.2.0+dfsg-1~bpo8+1
Sections: jessie2bpo

python-pyfaidx

😟 Install/upgrade

Piuparts failed:

Version: 0.4.8.1-1~bpo8+1
Sections: jessie2bpo

python-pymummer

😟 Install/upgrade

Piuparts failed:

Version: 0.11.0-5
Sections: oldstable222sid

python-pysam

😟 Install/upgrade

Piuparts failed:

Version: 0.9.1.4+ds-1~bpo8+1
Sections: jessie2bpo

python-ruffus

😟 Install/upgrade

Piuparts failed:

Version: 2.6.3+dfsg-4~bpo8+1
Sections: jessie2bpo

r-bioc-affy

😟 Install/upgrade

Piuparts failed:

Version: 1.52.0-1
Sections: jessie2Xstretch-rcmd

r-bioc-graph

😟 Install/upgrade

Piuparts failed:

Version: 1.52.0-1
Sections: jessie2Xstretch-rcmd

r-bioc-iranges

😟 Install/upgrade

Piuparts failed:

Version: 2.8.1-1
Sections: jessie2Xstretch-rcmd

r-bioc-limma

😟 Install/upgrade

Piuparts failed:

Version: 3.30.8+dfsg-1
Sections: jessie2Xstretch-rcmd

r-bioc-snpstats

😟 Install/upgrade

Piuparts failed:

Version: 1.24.0+dfsg-1
Sections: jessie2Xstretch-rcmd

r-cran-boolnet

😟 Install/upgrade

Piuparts failed:

Version: 2.1.3-1
Sections: jessie2Xstretch-rcmd

r-cran-distory

😟 Install/upgrade

Piuparts failed:

Version: 1.4.2-1~bpo8+1
Sections: jessie2bpo

r-cran-dt

😟 Install/upgrade

Piuparts failed:

Version: 0.5+dfsg-1~bpo9+1
Sections: stretch2bpo

r-cran-genetics

😟 Install/upgrade

Piuparts failed:

Version: 1.3.8.1-1
Sections: jessie-rcmd

r-cran-haplo.stats

😟 Install/upgrade

Piuparts failed:

Version: 1.7.7-1
Sections: jessie2Xstretch-rcmd

r-cran-phylobase

😟 Install/upgrade

Piuparts failed:

Version: 0.8.2-1~bpo8+1
Sections: jessie2bpo

r-cran-rncl

😟 Install/upgrade

Piuparts failed:

Version: 0.8.2-1~bpo8+1
Sections: jessie2bpo

r-cran-rocr

😟 Install/upgrade

Piuparts failed:

Version: 1.0-5-1
Sections: jessie-rcmd

r-cran-seqinr

😟 Install/upgrade

Piuparts failed:

Version: 3.3-3-1~bpo8+1
Sections: jessie2bpo

reprof

😟 Install/upgrade

Piuparts failed:

Version: 1.0.1-4
Sections: jessie2stretch

ruby-bio

😟 Install/upgrade

Piuparts failed:

Version: 1.5.0-2
Sections: jessie-lts2stretch jessie2stretch-rcmd jessie2Xstretch-rcmd

samtools-legacy

😟 Install/upgrade

Piuparts failed:

Version: 0.1.19-2
Sections: jessie jessie-rcmd jessie2Xstretch-rcmd

snp-sites

😟 Install/upgrade

Piuparts failed:

Version: 2.3.2-1
Sections: jessie2stretch-rcmd jessie2stretch jessie2Xstretch jessie-lts2stretch jessie2Xstretch-rcmd

spoa

😟 Install/upgrade

Piuparts failed:

Version: 1.1.3-2~bpo9+1
Sections: stretch2bpo

staden-io-lib

😟 Install/upgrade

Piuparts failed:

Version: 1.14.8-2
Sections: jessie2stretch jessie2stretch-rcmd jessie2Xstretch jessie-lts2stretch jessie2Xstretch-rcmd

biojava4-live

😑 Tests missing

Continuous integration (CI) tests are missing.

biojava6-live

😑 Tests missing

Continuous integration (CI) tests are missing.

btllib

😑 Tests missing

Continuous integration (CI) tests are missing.

capsule-maven-nextflow

😑 Tests missing

Continuous integration (CI) tests are missing.

cdk

😑 Tests missing

Continuous integration (CI) tests are missing.

cthreadpool

😑 Tests missing

Continuous integration (CI) tests are missing.

gatk-bwamem

😑 Tests missing

Continuous integration (CI) tests are missing.

gatk-fermilite

😑 Tests missing

Continuous integration (CI) tests are missing.

gatk-native-bindings

😑 Tests missing

Continuous integration (CI) tests are missing.

htscodecs

😑 Tests missing

Continuous integration (CI) tests are missing.

icb-utils

😑 Tests missing

Continuous integration (CI) tests are missing.

libbiosoup-dev

😑 Tests missing

Continuous integration (CI) tests are missing.

libgkarrays

😑 Tests missing

Continuous integration (CI) tests are missing.

libjloda-java

😑 Tests missing

Continuous integration (CI) tests are missing.

libqes

😑 Tests missing

Continuous integration (CI) tests are missing.

librdp-taxonomy-tree-java

😑 Tests missing

Continuous integration (CI) tests are missing.

libstatgen

😑 Tests missing

Continuous integration (CI) tests are missing.

libvbz-hdf-plugin

😑 Tests missing

Continuous integration (CI) tests are missing.

libwfa2

😑 Tests missing

Continuous integration (CI) tests are missing.

milib

😑 Tests missing

Continuous integration (CI) tests are missing.

pbcopper

😑 Tests missing

Continuous integration (CI) tests are missing.

python-seqcluster

😑 Tests missing

Continuous integration (CI) tests are missing.

savvy

😑 Tests missing

Continuous integration (CI) tests are missing.

xxsds-dynamic

😑 Tests missing

Continuous integration (CI) tests are missing.

Biology development - Quality Assurance

Summary