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Biology development - Quality Assurance

Summary

Autoremovals: 32

Migration issues: 44

CI failures: 129

Install issues: 129

No issues: 131/385

Debian Med packages for development of bioinformatics applications

This metapackage will install Debian packages which might be helpful for development of applications for biological research.

r-bioc-genomicranges

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 55 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

librcsb-core-wrapper

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2025-01-05
  • Bugs leading to autoremoval: #1089265

Continuous integration (CI) tests are failing:

Piuparts failed:

pyfai

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2025-01-17
  • Dependencies leading to autoremoval: eccodes pocl
  • Bugs in dependencies leading to autoremoval: #1086460 #1089911

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-cummerbund

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-dada2

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-genomicfeatures

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-gsva

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

Piuparts failed:

r-cran-amap

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Migration

Package marked for automatic removal:

  • Will be removed on: 2025-01-11
  • Bugs leading to autoremoval: #1088634
  • Will result in removal of r-bioc-ctc with total popcon score of 0

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 55 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

r-bioc-arrayexpress

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-biomformat

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-10
  • Dependencies leading to autoremoval: r-bioc-rhdf5
  • Bugs in dependencies leading to autoremoval: #1087826

Continuous integration (CI) tests are failing:

r-bioc-biovizbase

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-bsgenome

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-cner

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-deseq2

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-ensembldb

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-genomicalignments

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-gviz

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-multiassayexperiment

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-oligo

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-oligoclasses

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-phyloseq

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-10
  • Dependencies leading to autoremoval: r-bioc-rhdf5
  • Bugs in dependencies leading to autoremoval: #1087826

Continuous integration (CI) tests are failing:

r-bioc-purecn

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

r-bioc-rsamtools

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-rtracklayer

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-shortread

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-structuralvariantannotation

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-tfbstools

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-titancna

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-bioc-variantannotation

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

r-cran-shazam

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2025-01-19
  • Dependencies leading to autoremoval: r-bioc-genomicranges
  • Bugs in dependencies leading to autoremoval: #1088612

Continuous integration (CI) tests are failing:

libhmsbeagle

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Package marked for automatic removal:

  • Will be removed on: 2025-01-17
  • Dependencies leading to autoremoval: pocl
  • Bugs in dependencies leading to autoremoval: #1086460

Piuparts failed:

Continuous integration (CI) tests are missing.

r-bioc-ctc

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2025-01-11
  • Dependencies leading to autoremoval: r-cran-amap
  • Bugs in dependencies leading to autoremoval: #1088634

python-cogent

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 342 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild
  • Migrates after: numba

Piuparts failed:

q2cli

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 153 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: python3.11_pu, q2-feature-table, qiime

Piuparts failed:

q2-dada2

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 262 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

Piuparts failed:

qiime

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

r-bioc-mofa

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 16 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-ggally

Piuparts failed:

bcbio

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 290 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: freebayes, hts-nim-tools, mosdepth

fast5

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

genomicsdb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 392 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, depends

intake

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 265 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

libbio-tools-run-alignment-tcoffee-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 290 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

nim-hts

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 160 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: nim

python-anndata

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 309 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-array-api-compat

python-loompy

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 342 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Migrates after: numba

q2-alignment

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-cutadapt

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-demux

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 128 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-emperor

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-types

q2-feature-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 296 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-quality-control, q2-taxa, q2-types, qiime

q2-feature-table

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-fragment-insertion

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-phylogeny

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 128 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-alignment, q2-types, qiime

q2-quality-control

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 120 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-taxa, qiime

q2-quality-filter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-types, qiime

q2-sample-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-types, qiime

q2-taxa

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-types

q2-types

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: qiime

r-cran-metap

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 16 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

r-cran-seurat

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 174 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: r-cran-uwot

sra-sdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

  • Version: 2.8.1-2+dfsg-2~bpo8+1
  • Sections: jessie2bpo

toil

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 159 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

gatb-core

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

sumalibs

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

unifrac-tools

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

libpwiz

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 135 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

Continuous integration (CI) tests are missing.

pbseqlib

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 12 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

  • Version: 0~20161219-1~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libchado-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.23-2
  • Sections: jessie

Continuous integration (CI) tests are missing.

rdkit

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 46 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

bioperl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

consensuscore

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

ctdconverter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htseq

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htsjdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libace-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libsbml

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-biopython

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.68+dfsg-3~bpo8+1
  • Sections: jessie2bpo

python-biotools

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-freecontact

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-pbcore

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.2.7+dfsg-2~bpo8+1
  • Sections: jessie2bpo

python-skbio

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-altcdfenvs

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

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r-bioc-biocgenerics

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

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r-bioc-genomeinfodb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

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r-bioc-graph

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

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r-bioc-iranges

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r-bioc-limma

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r-bioc-metagenomeseq

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r-cran-nmf

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seqan2

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  • Version: 2.4.0+dfsg-8~bpo8+1
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hdf5

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
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  • Migrates after: mpich

Piuparts failed:

Continuous integration (CI) tests are missing.

openms

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

Continuous integration (CI) tests are missing.

nim-kexpr

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 160 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: nim

nim-lapper

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 160 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: nim

pytorch

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 343 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-metadata

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 117 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: qiime
  • Migrates after: q2-quality-filter, q2-types

biomaj3

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

gffread

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golang-github-biogo-hts

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joypy

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libbio-db-biofetch-perl

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libbio-db-embl-perl

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libbio-db-ncbihelper-perl

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libbio-tools-run-alignment-clustalw-perl

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libgoby-java

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libzerg-perl

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pybel

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pyranges

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python-airr

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python-alignlib

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python-bel-resources

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python-cgecore

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python-cooler

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python-ete3

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python-gtfparse

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python-pangolearn

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python-parasail

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python-pybedtools

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r-bioc-annotate

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r-bioc-annotationdbi

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r-bioc-annotationhub

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r-bioc-biobase

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r-bioc-biocneighbors

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r-bioc-biomart

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r-bioc-biostrings

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r-bioc-complexheatmap

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r-bioc-genefilter

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r-bioc-geneplotter

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r-bioc-geoquery

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r-bioc-go.db

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r-bioc-gseabase

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r-bioc-hypergraph

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r-bioc-org.hs.eg.db

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r-bioc-qusage

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r-bioc-rbgl

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r-bioc-s4vectors

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r-bioc-tximport

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r-cran-phangorn

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

r-cran-pscbs

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Continuous integration (CI) tests are failing:

seqan3

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

shasta

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

bambamc

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

biojava-live

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

bio-tradis

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

jebl2

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbio-mage-utils-perl

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbioparser-dev

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-core

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-phyl

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-phyl-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-popgen

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๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-qt

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-raa

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-seq

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libbpp-seq-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libdivsufsort

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libgenome

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libmems

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

  • Version: 1.6.0+4725-1~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

libmuscle

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libpal-java

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libpsortb

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

libseqlib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

ncbi-vdb

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

  • Version: 2.8.1+dfsg-2~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

python-cgelib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

sbmltoolbox

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

srf

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

ssm

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Piuparts failed:

Continuous integration (CI) tests are missing.

bamtools

๐Ÿ˜Ÿ Install/upgrade

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bioperl-run

๐Ÿ˜Ÿ Install/upgrade

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biosquid

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ctdopts

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cwltool

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fermi-lite

๐Ÿ˜Ÿ Install/upgrade

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ffindex

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freecontact

๐Ÿ˜Ÿ Install/upgrade

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genometools

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htslib

๐Ÿ˜Ÿ Install/upgrade

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kineticstools

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kmer

๐Ÿ˜Ÿ Install/upgrade

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libai-fann-perl

๐Ÿ˜Ÿ Install/upgrade

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libbio-mage-perl

๐Ÿ˜Ÿ Install/upgrade

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libdisorder

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libedlib

๐Ÿ˜Ÿ Install/upgrade

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libfastahack

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libgo-perl

๐Ÿ˜Ÿ Install/upgrade

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libnhgri-blastall-perl

๐Ÿ˜Ÿ Install/upgrade

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librg-blast-parser-perl

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

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librostlab

๐Ÿ˜Ÿ Install/upgrade

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librostlab-blast

๐Ÿ˜Ÿ Install/upgrade

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libsmithwaterman

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libsort-key-top-perl

๐Ÿ˜Ÿ Install/upgrade

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libssw

๐Ÿ˜Ÿ Install/upgrade

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libtabixpp

๐Ÿ˜Ÿ Install/upgrade

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libthread-pool

๐Ÿ˜Ÿ Install/upgrade

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libvcflib

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libzerg

๐Ÿ˜Ÿ Install/upgrade

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mcl

๐Ÿ˜Ÿ Install/upgrade

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minimap2

๐Ÿ˜Ÿ Install/upgrade

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ncbi-tools6

๐Ÿ˜Ÿ Install/upgrade

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pbbam

๐Ÿ˜Ÿ Install/upgrade

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python-cobra

๐Ÿ˜Ÿ Install/upgrade

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python-csb

๐Ÿ˜Ÿ Install/upgrade

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python-cutadapt

๐Ÿ˜Ÿ Install/upgrade

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python-dendropy

๐Ÿ˜Ÿ Install/upgrade

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python-pyfaidx

๐Ÿ˜Ÿ Install/upgrade

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python-pymummer

๐Ÿ˜Ÿ Install/upgrade

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python-pysam

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 0.9.1.4+ds-1~bpo8+1
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python-ruffus

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 2.6.3+dfsg-4~bpo8+1
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r-bioc-affy

๐Ÿ˜Ÿ Install/upgrade

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r-bioc-snpstats

๐Ÿ˜Ÿ Install/upgrade

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r-cran-adegenet

๐Ÿ˜Ÿ Install/upgrade

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๐Ÿ˜Ÿ Install/upgrade

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r-cran-boolnet

๐Ÿ˜Ÿ Install/upgrade

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r-cran-distory

๐Ÿ˜Ÿ Install/upgrade

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r-cran-dt

๐Ÿ˜Ÿ Install/upgrade

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r-cran-fastcluster

๐Ÿ˜Ÿ Install/upgrade

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r-cran-genetics

๐Ÿ˜Ÿ Install/upgrade

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r-cran-haplo.stats

๐Ÿ˜Ÿ Install/upgrade

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r-cran-phylobase

๐Ÿ˜Ÿ Install/upgrade

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r-cran-rncl

๐Ÿ˜Ÿ Install/upgrade

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r-cran-rocr

๐Ÿ˜Ÿ Install/upgrade

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r-cran-seqinr

๐Ÿ˜Ÿ Install/upgrade

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reprof

๐Ÿ˜Ÿ Install/upgrade

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ruby-bio

๐Ÿ˜Ÿ Install/upgrade

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samtools-legacy

๐Ÿ˜Ÿ Install/upgrade

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snakemake

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

  • Version: 3.9.0+dfsg-2~bpo8+1
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snp-sites

๐Ÿ˜Ÿ Install/upgrade

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spoa

๐Ÿ˜Ÿ Install/upgrade

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staden-io-lib

๐Ÿ˜Ÿ Install/upgrade

Piuparts failed:

biojava4-live

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

biojava6-live

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

btllib

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

capsule-maven-nextflow

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

cdk

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

cthreadpool

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-bwamem

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-fermilite

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

gatk-native-bindings

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

htscodecs

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

icb-utils

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libbiosoup-dev

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libgkarrays

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libjloda-java

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libmaus2

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libqes

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

librdp-taxonomy-tree-java

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libstatgen

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libvbz-hdf-plugin

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

libwfa2

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

milib

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

pbcopper

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

python-seqcluster

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

savvy

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.

xxsds-dynamic

๐Ÿ˜‘ Tests missing

Continuous integration (CI) tests are missing.