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Biology development - Quality Assurance

Summary

Autoremovals: 22

Migration issues: 45

CI failures: 103

Install issues: 133

No issues: 148/387

Debian Med packages for development of bioinformatics applications

This metapackage will install Debian packages which might be helpful for development of applications for biological research.

shasta

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Package marked for automatic removal:

  • Will be removed on: 2024-05-19
  • Bugs leading to autoremoval: #1069370

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: boost1.83

bioperl-run

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

Piuparts failed:

htseq

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

Piuparts failed:

python-pbcore

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 1.2.7+dfsg-2~bpo8+1
  • Sections: jessie2bpo

libbio-tools-run-alignment-clustalw-perl

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

nim-hts

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

python-cooler

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-05-19
  • Bugs leading to autoremoval: #1069359
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are failing:

python-pybedtools

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

r-cran-metamix

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-05-19
  • Bugs leading to autoremoval: #1069509

Continuous integration (CI) tests are failing:

r-cran-seurat

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

Continuous integration (CI) tests are failing:

toil

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ CI

Package marked for automatic removal:

  • Will be removed on: 2024-06-01
  • Dependencies leading to autoremoval: docker.io
  • Bugs in dependencies leading to autoremoval: #1068755

Continuous integration (CI) tests are failing:

kineticstools

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Piuparts failed:

python-pysam

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜Ÿ Install/upgrade

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Piuparts failed:

  • Version: 0.9.1.4+ds-1~bpo8+1
  • Sections: jessie2bpo

python-seqcluster

๐Ÿ˜Ÿ Autoremoval

๐Ÿ˜‘ Tests missing

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

Continuous integration (CI) tests are missing.

libbio-tools-phylo-paml-perl

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

mirtop

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

python-deeptools

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

python-gffutils

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

python-nanoget

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

python-pbcommand

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

python-sqt

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-02
  • Dependencies leading to autoremoval: python-pybedtools
  • Bugs in dependencies leading to autoremoval: #1068960

r-bioc-gsva

๐Ÿ˜Ÿ Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2024-06-03
  • Dependencies leading to autoremoval: r-cran-irlba
  • Bugs in dependencies leading to autoremoval: #1069414

python-cogent

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 111 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: numba

Piuparts failed:

q2cli

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: q2-feature-table

Piuparts failed:

  • Version: 2024.2.0-1
  • Sections: sid

q2-dada2

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 31 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

Piuparts failed:

q2-feature-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 65 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table, q2-quality-control

Piuparts failed:

  • Version: 2024.2.0-1
  • Sections: sid

q2-sample-classifier

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: q2-feature-table

Piuparts failed:

  • Version: 2024.2.0-1
  • Sections: sid

bcbio

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 59 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends
  • Invalidated by another package
  • Blocked by: freebayes

genomicsdb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 161 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, depends
  • Migrates after: openmpi

intake

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 34 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

libbio-tools-run-alignment-tcoffee-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 59 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

libsbml

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Maybe temporary, maybe blocked but Britney is missing information
  • Reason: autopkgtest, missingbuild
  • Migrates after: glibc

Piuparts failed:

python-anndata

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 78 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-array-api-compat

python-freecontact

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: freecontact

Piuparts failed:

pytorch

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 112 days.
  • Verdict: Maybe temporary, maybe blocked but Britney is missing information
  • Reason: autopkgtest, missingbuild
  • Migrates after: opencv

q2-cutadapt

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-demux

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 65 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-emperor

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-feature-table

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-fragment-insertion

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-phylogeny

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

q2-quality-control

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 65 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: q2-feature-table

q2-quality-filter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest

sra-sdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

gatb-core

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

unifrac-tools

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

hdf5

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 65 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: mpich
  • Migrates after: openmpi

Piuparts failed:

Continuous integration (CI) tests are missing.

libpwiz

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 67 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: boost1.83

Piuparts failed:

Continuous integration (CI) tests are missing.

ssm

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Not in testing for 35 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: libccp4

Piuparts failed:

Continuous integration (CI) tests are missing.

ffindex

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 67 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: openmpi

Piuparts failed:

freecontact

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 66 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

r-cran-haplo.stats

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 43 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: r-cran-rms

Piuparts failed:

rdkit

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 31 days.
  • Verdict: Rejected/violates migration policy/introduces a regression

Piuparts failed:

bioperl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

consensuscore

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

ctdconverter

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

golang-github-biogo-hts

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

htsjdk

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libace-perl

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

libgff

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

librcsb-core-wrapper

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-biopython

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-biotools

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

python-ruffus

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 2.6.3+dfsg-4~bpo8+1
  • Sections: jessie2bpo

qiime

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-biocgenerics

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-cummerbund

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-genomeinfodb

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-bioc-iranges

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

r-cran-nmf

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

seqan2

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 2.4.0+dfsg-8~bpo8+1
  • Sections: jessie2bpo

snakemake

๐Ÿ˜Ÿ CI

๐Ÿ˜Ÿ Install/upgrade

Continuous integration (CI) tests are failing:

Piuparts failed:

  • Version: 3.9.0+dfsg-2~bpo8+1
  • Sections: jessie2bpo

libmaus2

๐Ÿ˜Ÿ Migration

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 18 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest, missingbuild

Continuous integration (CI) tests are missing.

openms

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

Continuous integration (CI) tests are missing.

pbseqlib

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

  • Version: 0~20161219-1~bpo8+1
  • Sections: jessie2bpo

Continuous integration (CI) tests are missing.

sbmltoolbox

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: libsbml

Piuparts failed:

Continuous integration (CI) tests are missing.

biobambam2

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 16 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: libmaus2

fast5

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: hdf5

Piuparts failed:

libpdb-redo

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 35 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends
  • Invalidated by another package
  • Blocked by: libccp4
  • Migrates after: clipper

python-cobra

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: libsbml

Piuparts failed:

python-loompy

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Not in testing for 111 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: numba

q2-metadata

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Has been trying to migrate for 77 days.
  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: build-depends, depends
  • Invalidated by another package
  • Blocked by: q2-quality-filter

biomaj3

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

cwltest

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

gffread

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

joypy

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-asn1-entrezgene-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-cluster-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-biofetch-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-embl-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-db-ncbihelper-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-eutilities-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-featureio-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libbio-variation-perl

๐Ÿ˜Ÿ CI

Continuous integration (CI) tests are failing:

libgoby-java

๐Ÿ˜Ÿ CI

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libzerg-perl

๐Ÿ˜Ÿ CI

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pybel

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pyranges

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python-airr

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python-alignlib

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python-bel-resources

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python-biom-format

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python-cgecore

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python-ete3

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python-pangolearn

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python-parasail

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python-pyflow

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python-skbio

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q2-alignment

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q2-taxa

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q2-types

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r-bioc-annotationhub

๐Ÿ˜Ÿ CI

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r-bioc-biostrings

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r-bioc-bsgenome

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r-bioc-deseq2

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r-bioc-ensembldb

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r-bioc-genomicalignments

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r-bioc-genomicfeatures

๐Ÿ˜Ÿ CI

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r-bioc-genomicranges

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r-bioc-gviz

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r-bioc-mofa

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r-bioc-purecn

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r-bioc-rtracklayer

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r-bioc-s4vectors

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r-bioc-shortread

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r-bioc-structuralvariantannotation

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r-cran-shazam

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ruby-crb-blast

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ruby-rgfa

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seqan3

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sumalibs

๐Ÿ˜Ÿ CI

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pyfai

๐Ÿ˜Ÿ Migration

๐Ÿ˜Ÿ Install/upgrade

Migration from unstable to testing is blocked:

  • Not in testing for 146 days.
  • Verdict: No excuse
  • Migrates after: silx

Piuparts failed:

libfreecontact-perl

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Verdict: Cannot migrate due to another item, which is blocked (please check which dependencies are stuck)
  • Reason: depends
  • Invalidated by another package
  • Blocked by: freecontact

networkx

๐Ÿ˜Ÿ Migration

Migration from unstable to testing is blocked:

  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-contextily, python-momepy

bambamc

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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biojava-live

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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bio-tradis

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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cdk

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gatk-native-bindings

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๐Ÿ˜‘ Tests missing

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jebl2

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbio-mage-utils-perl

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbioparser-dev

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbpp-core

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๐Ÿ˜‘ Tests missing

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libbpp-phyl

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๐Ÿ˜‘ Tests missing

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libbpp-phyl-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbpp-popgen

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbpp-qt

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbpp-raa

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libbpp-seq

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๐Ÿ˜‘ Tests missing

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libbpp-seq-omics

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libchado-perl

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๐Ÿ˜‘ Tests missing

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libdivsufsort

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๐Ÿ˜‘ Tests missing

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libgenome

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๐Ÿ˜‘ Tests missing

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libhmsbeagle

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libjloda-java

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๐Ÿ˜‘ Tests missing

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libmems

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๐Ÿ˜‘ Tests missing

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Continuous integration (CI) tests are missing.

libmuscle

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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libpal-java

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๐Ÿ˜‘ Tests missing

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libpsortb

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๐Ÿ˜‘ Tests missing

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librdp-taxonomy-tree-java

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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Continuous integration (CI) tests are missing.

libseqlib

๐Ÿ˜Ÿ Install/upgrade

๐Ÿ˜‘ Tests missing

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Continuous integration (CI) tests are missing.

libstatgen

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๐Ÿ˜‘ Tests missing

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Continuous integration (CI) tests are missing.

ncbi-vdb

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pbcopper

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๐Ÿ˜‘ Tests missing

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python-cgelib

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srf

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bamtools

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biosquid

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ctdopts

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cwltool

๐Ÿ˜Ÿ Install/upgrade

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fermi-lite

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genometools

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htslib

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kmer

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libai-fann-perl

๐Ÿ˜Ÿ Install/upgrade

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libbio-graphics-perl

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libbio-mage-perl

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libdisorder

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libedlib

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libfastahack

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libgo-perl

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libnhgri-blastall-perl

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librostlab

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librostlab-blast

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libsmithwaterman

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libsort-key-top-perl

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libssw

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libtabixpp

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libthread-pool

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libvcflib

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libzerg

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mcl

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minimap2

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ncbi-tools6

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pbbam

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python-csb

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python-cutadapt

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python-dendropy

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python-pyfaidx

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python-pymummer

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r-bioc-affy

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r-bioc-altcdfenvs

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r-bioc-graph

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r-bioc-limma

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r-bioc-snpstats

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r-cran-adegenet

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r-cran-adephylo

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r-cran-boolnet

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r-cran-distory

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r-cran-dt

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r-cran-fastcluster

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r-cran-genetics

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r-cran-phylobase

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r-cran-rocr

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r-cran-seqinr

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reprof

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ruby-bio

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samtools-legacy

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snp-sites

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spoa

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staden-io-lib

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biojava4-live

๐Ÿ˜‘ Tests missing

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biojava6-live

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btllib

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capsule-maven-nextflow

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cthreadpool

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gatk-bwamem

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gatk-fermilite

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htscodecs

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icb-utils

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libbiosoup-dev

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libgkarrays

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libqes

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libvbz-hdf-plugin

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libwfa2

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milib

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savvy

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xxsds-dynamic

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