Debian Med Project
Help us to see Debian used by medical practitioners and biomedical researchers! Join us on the Salsa page.
Summary
Bugs of task imaging-dev
Total bugs: 87
Open bugs: 79
Fixed bugs: 8
Links to other tasks
Tasks overview
Biology 287 (2532)
Biology development 136 (1184)
Phylogeny 7 (54)
Cloud 46 (504)
Covid-19 180 (1800)
Medical data 2 (10)
Dental 2 (12)
Epidemiology 11 (102)
Imaging 198 (826)
Laboratory 1 (9)
Oncology 1 (3)
Pharmacology 1 (9)
Physics 27 (192)
Practice 8 (51)
Psychology 12 (121)
Research 0 (0)
Statistics 4 (16)
Tools 39 (240)
Typesetting 68 (543)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 5 0
important 6 17
normal 23 3
minor 11 2
wishlist 10 2

Summary bugs page of task Imaging development

Immediately looking into bugs of the dependencies of this task is advised (576)*

Open bugs in dependent packages

5 serious, 6 important, 23 normal, 11 minor, 10 wishlist
bart (1) Homepage: https://mrirecon.github.io/bart/ Vcs Debian Med Packaging Team
1068164 bart: please add support for loong64
bioxtasraw (1) Homepage: https://sourceforge.net/p/bioxtasraw/git/ Vcs Debian Science Maintainers
1085363 bioxtasraw: Python SyntaxWarning
cimg (1) Homepage: http://cimg.sourceforge.net/ Vcs Debian Science Maintainers
1068153 cimg: CVE-2024-26540 fixed-upstream, security, upstream
dipy (2) Homepage: https://dipy.org Vcs Debian Med Packaging Team
1079674 dipy: test_fss_single_point_slines fails with scipy 1.14
1081694 FTBFS with Python 3.13 fixed-upstream, patch, upstream
gdcm (4) Homepage: http://gdcm.sourceforge.net/ Vcs Debian Med Packaging Team
731435 warning: iteration 55823u invokes undefined behavior [-Waggressive-loop-optimizations] upstream
749783 gdcm: Conflicting declarations of jpeg_memory_mgr may lead to invalid function calls
826048 Faulty CMake file impairs compiling against GDCM moreinfo, wontfix
1086435 libgdcm-tools: gdcmscu fails with "ProtocolStream as nullptr is invalid" upstream
gmic (5) Homepage: http://gmic.sourceforge.net/ Vcs Bernd Zeimetz
795527 gmic: please package the Hald-CLUT files
883962 gmic: please make bash-completion code to load dynamically patch, upstream
926733 gimp-gmic does not load
1015264 gmic: homepage out of date in info file
1053329 gimp-gmic: new upstream version available
insighttoolkit5 (1) Homepage: http://www.itk.org/ Vcs Debian Med Packaging Team
853752 src:insighttoolkit5: Add documentation package
ismrmrd (1) Homepage: https://ismrmrd.github.io/ Vcs Debian Med Packaging Team
863168 ismrmrd FTBFS on armhf: 1 failure is detected in the test module "ISMRMRD Unit Tests" ftbfs, wontfix
libmialm (1) Homepage: http://mia.sourceforge.net Vcs Debian Med Packaging Team
1046208 libmialm: Fails to build source after successful build ftbfs, sid, trixie
libvigraimpex (3) Homepage: https://ukoethe.github.io/vigra/ Vcs Debian Science Maintainers
812852 libvigraimpex: fail of test_multiarray_chunked on ppc64el
852051 libvigraimpex: captures build path (doesn't build reproducible)
1035161 libvigraimpex: please add autopkgtests (to add coverage for python3-numpy)
mia (1) Homepage: https://mia.sourceforge.net Vcs Debian Med Packaging Team
1075270 mia: ftbfs with GCC-14 ftbfs, sid, trixie
nibabel (1) Homepage: https://nipy.org/nibabel/ Vcs Debian Med Packaging Team
868229 NotImplementedError: Pixel Data is compressed in a format pydicom does not yet handle. Cannot return array
nifticlib (1) Homepage: https://github.com/NIFTI-Imaging/nifti_clib Vcs Debian Med Packaging Team
587914 libnifti1: casting in error messages leads to confusion not clarification upstream
octave-dicom (1) Homepage: https://gnu-octave.github.io/packages/dicom/ Vcs Debian Octave Group
1075721 octave-dicom: use-after-free with dicomdict fixed-upstream
opencv (6) Homepage: https://opencv.org Vcs Debian Science Team
989958 libopencv-*-dev: Missing pkg-config file (.pc) upstream
1017348 libopencv-imgproc406: cv::boundingRect fails on ppc64el
1040356 libopencv-highgui406: cv2.waitKeyEx doesn't respond with extended code to alphabet keyboard button
1041650 libopencv-dev: license in /usr/share/licenses
1046728 opencv: Fails to build source after successful build ftbfs, sid, trixie
1084865 opencv: FTBFS on alpha due to missing files during dh_install
openigtlink (2) Homepage: http://openigtlink.org Vcs Debian Science Team
729932 failing tests on armel
1010511 openigtlink: Fails to close socket on Linux
openslide-python (1) Homepage: https://openslide.org Vcs Debian Med Packaging Team
842150 RunningDeepZoomServerOnApache
pymia (2) Homepage: http://mia.sourceforge.net Vcs Debian Med Packaging Team
1035200 pymia: please add autopkgtests (to add coverage for python3-numpy)
1048409 pymia: Fails to build source after successful build ftbfs, sid, trixie
python-mne (2) Homepage: https://martinos.org/mne Vcs Debian Med Packaging Team
733270 please provide python-mne-doc package
733271 ship all data files needed for testing
pytorch-vision (1) Homepage: https://github.com/pytorch/vision Vcs Debian Deep Learning Team
1077499 pytorch-vision: debian/control requires torch but torch-cuda should also be possible as alternative
pyxnat (1) Homepage: https://github.com/pyxnat/pyxnat Vcs Debian Med Packaging Team
1086983 pyxnat: Python SyntaxWarning
sight (1) Homepage: https://git.ircad.fr/Sight/sight Vcs Debian Med Packaging Team
1026374 sight: provide dicomxplorer executable
teem (3) Homepage: http://teem.sourceforge.net/ Vcs Debian Science Maintainers
880316 teem: FTBFS: Test failures bookworm, bullseye, buster, ftbfs, sid, trixie
983955 teem: ftbfs with -march=x86-64-v3
1068627 teem: please add support for loong64 patch
vtk9 (9) Homepage: https://www.vtk.org/ Vcs Debian Science Maintainers
979306 QVTKOpenGLWidget.h: No such file or directory
983620 python3-vedo: Segfault rendering example files
1016549 python3-vtk9: disturbed access of vtkGenericOpenGLRenderWindow
1035426 libvtk9-dev ships uncompilable headers
1050506 vtk9: shipped FindEXPAT.cmake is broken with CMake 3.27+ ftbfs
1077978 package assumes that the default JVM is the server VM ftbfs, sid, trixie
1078743 vtk9: BD-Uninstallable on 32-bit architectures after #1068320 ftbfs
1079541 SyntaxWarning while setting up the package: invalid escape sequence '\S'
1085768 vtk9: Python SyntaxWarning
vtk-dicom (1) Homepage: http://github.com/dgobbi/vtk-dicom/ Vcs Debian Med Packaging Team
1063195 vtk-dicom: NMU diff for 64-bit time_t transition patch, pending, sid, trixie
xmedcon (2) Homepage: https://xmedcon.sourceforge.net/ Vcs Debian Med Packaging Team
671828 xmedcon: Cannot open file with YBR photometric interpretation
779707 Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file" upstream, wontfix

Open bugs in suggested packages

17 important, 3 normal, 2 minor, 2 wishlist
camp (1) Homepage: https://github.com/IRCAD/camp Vcs Debian Med Packaging Team
900181 camp: FTBFS on 32bit big endian: check metaclass->function("f4").call(object, camp::Args(1, 4, 15)).to<unsigned long>() == 20 has failed ftbfs
eegdev (1) Homepage: https://sourceforge.net/projects/eegdev/ Vcs Debian Med Packaging Team
1079978 eegdev-plugins-free: Add Appstream metainfo announcing HW support patch
freeimage (21) Homepage: https://freeimage.sourceforge.net/ Vcs Debian Science Maintainers
880206 freeimage: FTBFS on hppa: testImageType.cpp:428: `bResult' failed. upstream
887584 Constructing a special file can cause libfreeimage3 to crash upstream
947477 freeimage: CVE-2019-12212 security, upstream
947478 freeimage: CVE-2019-12214 security, upstream
1032666 freeimage: CVE-2021-33367 security, upstream
1045003 freeimage: Fails to build source after successful build ftbfs, sid, trixie
1049795 freeimage: Fails to build binary packages again after successful build ftbfs, sid, trixie
1051736 freeimage: CVE-2020-21426 security, upstream
1055301 freeimage: CVE-2021-40262 security, upstream
1055302 freeimage: CVE-2021-40263 security, upstream
1055303 freeimage: CVE-2021-40264 security, upstream
1055304 freeimage: CVE-2021-40265 security, upstream
1055305 freeimage: CVE-2021-40266 security, upstream
1059152 freeimage: CVE-2020-24292 CVE-2020-24293 CVE-2020-24294 CVE-2020-24295 security, upstream
1060691 freeimage: CVE-2023-47992 CVE-2023-47993 CVE-2023-47994 CVE-2023-47996 CVE-2023-47997 security, upstream
1060862 freeimage: CVE-2023-47995 security, upstream
1068461 freeimage: CVE-2024-28562 CVE-2024-28563 CVE-2024-28564 CVE-2024-28565 CVE-2024-28566 CVE-2024-28567 CVE-2024-28568 CVE-2024-28569 CVE-2024-28570 CVE-2024-28571 CVE-2024-28572 CVE-2024-28573 CVE-2024-28574 CVE-2024-28574 CVE-2024-28575 CVE-2024-28576 CVE-2024-28577 CVE-2024-28578 CVE-2024-28579 CVE-2024-28580 CVE-2024-28581 CVE-2024-28582 CVE-2024-28583 CVE-2024-28584 security, upstream
1068718 freeimage: consider packaging r1909?
1082375 freeimage: Upstream-Contact email unreachable
1082380 freeimage: CVE-2024-31570 security, upstream
1082848 freeimage: CVE-2024-9029 security, upstream
xdffileio (1) Homepage: https://cnbi.epfl.ch/software/xdffileio.html Vcs Debian Med Packaging Team
1009158 xdffileio: Add autopkgtest newcomer

Done bugs

bart (1) Homepage: https://mrirecon.github.io/bart/ Vcs Debian Med Packaging Team
1063998 bart FTCBFS: rebuilds during dh_auto_install patch
gdcm (1) Homepage: http://gdcm.sourceforge.net/ Vcs Debian Med Packaging Team
1070387 gdcm: CVE-2024-25569 CVE-2024-22373 CVE-2024-22391 security, upstream
nipype (4) Homepage: https://nipype.readthedocs.io/en/latest/ Vcs Debian Med Packaging Team
1064732 nipype: FTBFS: make[1]: *** [debian/rules:39: override_dh_auto_test] Error 1 ftbfs, sid, trixie
1081079 python3-nipype: unsatisfiable dependency ftbfs, patch, sid, trixie
1084625 nipype: removal of Python standard libraries in Python 3.13 fixed-upstream, upstream
1085740 nipype: Python SyntaxWarning
openslide-python (1) Homepage: https://openslide.org Vcs Debian Med Packaging Team
1086333 OpenSlide Python 1.4.0 released
python-imageio (1) Homepage: https://imageio.github.io/ Vcs Debian Science Maintainers
1055158 python-imageio's autopkg tests fails with pillow 10.1.0
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Thu, 14 Nov 2024 18:19:11 -0000