Debian Science Project
Summary
Bugs of task numericalcomputation
Total bugs: 153
Open bugs: 142
Fixed bugs: 11
Links to other tasks
Tasks overview
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Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 5 2
important 20 7
normal 48 4
minor 25 8
wishlist 19 4

Summary bugs page of task Numerical computation

Immediately looking into bugs of the dependencies of this task is advised (1032)*

Open bugs in dependent packages

5 serious, 20 important, 48 normal, 25 minor, 19 wishlist
admesh (1) Homepage: https://github.com/admesh/admesh Vcs Debian Science Maintainers
1128613 admesh: CVE-2026-2653 fixed-upstream, security, upstream
calculix-cgx (2) Homepage: http://www.calculix.de Vcs Debian Science Maintainers
959695 calculix-cgx: freeglut (cgx): Menu manipulation not allowed while menus in use.
1043706 calculix-cgx: Fails to build source after successful build forky, ftbfs, sid, trixie
ceres-solver (1) Homepage: http://ceres-solver.org Vcs Debian Science Team
1059953 libceres3: ceres-solver built without CUDA support
deap (1) Homepage: http://deap.gel.ulaval.ca/doc/default/ Vcs Debian Python Team
1085536 deap: Python SyntaxWarning
esys-particle (2) Homepage: https://launchpad.net/esys-particle Vcs Debian Science Maintainers
1044644 esys-particle: Fails to build source after successful build forky, ftbfs, sid, trixie
1133469 esys-particle: ftbfs with GCC-16 forky, ftbfs, sid
gnudatalanguage (3) Homepage: https://github.com/gnudatalanguage/gdl Vcs Debian Astronomy Team
753618 wishlist: gnudatalanguage-nox package
877294 gnudatalanguage: gdl segfaults while running testsuite upstream
976912 coyote: FTBFS on ppc64el (arch:all-only src pkg): Magick: abort due to signal 6 (SIGABRT) "Abort"... bullseye, ftbfs, sid
guiqwt (2) Homepage: https://github.com/PierreRaybaut/guiqwt Vcs Debian Science Maintainers
1035265 guiqwt: please add autopkgtests (to add coverage for python3-numpy)
1085632 guiqwt: Python SyntaxWarning
ipython (2) Homepage: https://github.com/ipython/ipython Vcs Debian Python Team
955775 ipython3: entry_points not working with virtualenvwrapper
1063528 calling less PAGER a second time after resizing the terminal does not use new size
lammps (1) Homepage: https://lammps.sandia.gov/ Vcs Debian Science Maintainers
1082818 lammps: enable AMD GPU support
librsb (2) Homepage: http://librsb.sourceforge.net Vcs Debian Science Maintainers
1104506 librsb: tunes runtime for build machine
1108101 librsb FTCBFS: unsatisfiable toolchain dependencies patch
liggghts (1) Homepage: https://www.liggghts.com/ Vcs Debian Science Maintainers
1048092 liggghts: Fails to build source after successful build forky, ftbfs, sid, trixie
lmfit-py (1) Homepage: https://lmfit.github.io/lmfit-py/ Vcs Debian Science Maintainers
1081573 python-lmfit-doc: regression: absence of matplotlib code hyperlinks
matplotlib (9) Homepage: http://matplotlib.org/ Vcs Debian Python Team
377271 duplicate copy of agg shipped and used
604402 python-matplotlib-data: includes local copies of fonts
796905 python3-matplotlib: Matplotlib startup feels extremely slow
797918 python3-matplotlib: Matplotlib startup feels extremely slow
977469 matplotlib: Please make package bootstrappable
994079 python3-matplotlib: TkAgg backend emits errors on savefig() with tight option
1047769 matplotlib: Fails to build source after successful build ftbfs, sid, trixie
1074159 matplotlib: old system version blocks doc build for new version fixed-upstream
1074212 matplotlib: build-time test failure is ignored
metis (4) Homepage: http://glaros.dtc.umn.edu/gkhome/metis/metis/overview Vcs Debian Science Maintainers
855241 libmetis-dev: missing libmetis.a
961183 metis: providing a 64-bit build
1040985 metis: New upstream release (v5.2.1, 2022 Dec 5)
1047473 metis: Fails to build source after successful build forky, ftbfs, sid, trixie
numpy (4) Homepage: https://www.numpy.org/ Vcs Debian Python Team
524073 python3-numpy: please split BLAS/LAPACK support into an optional package
975546 Please, support multiple flavor of numpy for different use cases.
1023339 Package numpy and matplotlib for PyPy3
1046175 numpy: Fails to build source after successful build ftbfs, sid, trixie
octave (16) Homepage: https://www.octave.org/ Vcs Debian Octave Group
565216 octave: add support for loading HDF5 created outside Octave fixed-upstream, upstream, wontfix
598059 octave3.2: axis equal/square incorrect for gnuplot 4.4 fixed-upstream, upstream, wontfix
675509 octave: FLTK graphics backend not compatible with --no-line-editing option upstream, wontfix
741097 octave: nox package of Octave
783624 octave: Bad plotted data against time with long arrays confirmed, upstream
913638 Please, Depends: info-browser | info wontfix
921207 octave: gives wrong results when used with MKL
933300 liboctave-dev should not depend on a toolchain wontfix
954858 octave: GL warning 1.3 not suported
978029 octave: unable to load appropriate font
998842 octave: inv() causes segfault if io package pre-loaded
1061644 octave-dev: The package should include an ld.so.conf fragment pointing to the shared libraries confirmed
1082580 octave: does not find nvector/nvector_serial.h from sundials 7 upstream
1103896 octave: unlink raises an error on failure, but his is undocumented upstream
1109940 octave builds on trixie or higher releases are not fully configured to use sundials. upstream
1122813 octave --gui shows alert box: Could not setup the data required for the documentation viewer.
pplpy (1) Homepage: https://gitlab.com/videlec/pplpy Vcs Debian Science Team
1056832 pplpy: ftbfs with cython 3.0.x forky, sid, trixie
pysph (1) Homepage: https://github.com/pypr/pysph Vcs Debian Science Maintainers
1136867 pysph: FTBFS: E TypeError: only 0-dimensional arrays can be converted to Python scalars forky, ftbfs, sid
python-bitstring (3) Homepage: https://github.com/scott-griffiths/bitstring Vcs Debian Python Team
1138121 Updating the python-bitstring Uploaders list
1138955 Updating the python-bitstring Uploaders list
1138957 Updating the python-bitstring Uploaders list
python-csa (2) Homepage: https://github.com/INCF/csa Not maintained in Vcs Mikael Djurfeldt
1035218 python-csa: please add autopkgtests (to add coverage for python3-numpy)
1036518 python-csa: please add autopkgtests (to add coverage for python3-matplotlib)
python-escript (4) Homepage: https://github.com/esys-escript/esys-escript.github.io Vcs Debian Science Maintainers
1035226 python-escript: please add autopkgtests (to add coverage for python3-numpy)
1041187 does not respect compilation flags from dpkg-buildflags
1085909 python-escript: Python SyntaxWarning
1089841 python-escript: Drop line with true in debian/rules
python-sparse (5) Homepage: https://github.com/pydata/sparse Vcs Debian Python Team
1055847 python-sparse: autopkgtest regression on arm64 and s390x
1058485 python-sparse: please (temporarily) drop python3-numba dependencies
1063958 python-sparse: autopkgtest regression with pytest 8
1071811 python-sparse: FTBFS: INTERNALERROR> pluggy._manager.PluginValidationError: unknown hook 'pytest_cmdline_preparse' in plugin <module 'tests.conftest' from '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_sparse/build/tests/conftest.py'> ftbfs
1138145 Updating the python-sparse Uploaders list
python-xarray (4) Homepage: https://xarray.pydata.org/ Vcs Debian Science Maintainers
1064326 python-xarray: intermittent hang in test_roundtrip_coordinates
1064368 python-xarray: intermittent segfault in test_open_mfdataset_manyfiles[netcdf4-20-True-*-5]
1064370 python-xarray: intermittent fail in TestOpenMFDatasetWithDataVarsAndCoordsKw
1138147 Updating the python-xarray Uploaders list
pyzo (1) Homepage: http://www.pyzo.org/ Vcs Debian Science Maintainers
1138148 Updating the pyzo Uploaders list
r-base (9) Homepage: https://www.R-project.org/ Vcs Dirk Eddelbuettel
702354 Useless (and possibly undefined) conversion from double to enum
710289 r-base-core: Partial upgrades from wheezy to jessie are broken
861636 FTBFS when sources imported into git
862112 r-base-dev: Generate reproducible output independently of the build path patch, upstream
888399 r-base-core: [m68k] bogus "missing value where TRUE/FALSE needed" errors upstream
928653 r-base: change R_LIBS_USER default location
982465 r-base: dyn.load not useful for system libraries
1036308 r-base: R CMD check --as-cran fails for packages with math in help files
1126948 r-base-core: could use dh_usrlocal to create /usr/local/lib/R
scilab (7) Homepage: https://www.scilab.org Vcs Debian Science Maintainers
712781 src:scilab: please use SLICOT Debian package instead of embedded copy help
747211 scilab: Allow scilab gui to start without opengl
984799 scilab-full-bin for armhf and i386
988426 scilab,scilab-cli,scilab-test: metapackages uninstallable on 32-bit architectures wontfix
1105620 scilab: FTBFS with make --shuffle=reverse: make[2]: *** No rule to make target 'modules/libscilab.la', needed by 'scilab-bin'. Stop. forky, ftbfs, sid, trixie
1133627 scilab: ftbfs with GCC-16 forky, ftbfs, sid
1139619 scilab: FTBFS against HDF5 2.1.0 ftbfs, patch
sdpb (1) Homepage: https://github.com/davidsd/sdpb Vcs Debian Science Maintainers
1140369 sdpb: please make the build reproducible patch
sfepy (1) Homepage: https://sfepy.org Vcs Debian Science Maintainers
1124901 sfepy: please build using the default build flags
sleef (2) Homepage: https://sleef.org/ Vcs Debian Science Maintainers
1106068 sleef: add loong64 support
1121829 libsleef-dev: sleefdft is not included
spyder (4) Homepage: https://github.com/spyder-ide/spyder Vcs Debian Science Maintainers
1037029 spyder: Saving files window does not respect current active Gnome dark mode
1069806 spyder: half hidden titles in "configuration per file" window moreinfo
1070485 spyder: fails with pytest 8 due to dependency on pytest-lazy-fixture upstream
1142289 python3-spyder: Depends: python3-jedi (< 0.20~) but 0.20.0+ds1-1 is to be installed fixed-upstream
suitesparse (1) Homepage: http://suitesparse.com Vcs Debian Science Maintainers
989550 suitesparse: enhance 64-bit support in suitesparse
sundials (7) Homepage: https://www.llnl.gov/CASC/sundials/ Vcs Debian Science Maintainers
950574 sundials: Should ship pkgconfig files
998184 libsundials-sunlinsol2: dependency on certain flavor of libsundials-nvecparallel
1015672 sundials: ftbfs with LTO (link time optimization) enabled forky, sid, trixie
1026947 libsundials-dev: Provide pkg-config files
1082085 libsundials-dev: sundials_config.h sets SUNDIALS_MPI_ENABLED=1 even for serial jobs
1114475 sundials: FTBFS on hppa - test failures
1133637 sundials: ftbfs with GCC-16 forky, ftbfs, sid
toulbar2 (3) Homepage: http://www.inra.fr/mia/T/toulbar2 Vcs Debian Science Maintainers
1046877 toulbar2: Fails to build source after successful build forky, ftbfs, sid, trixie
1080187 toulbar2: FTBFS with doxygen 1.12.0 ftbfs
1113581 toulbar2: FTBFS with CMake 4 forky, ftbfs, sid
vitables (2) Homepage: https://vitables.org/ Vcs Debian Science Maintainers
1035267 vitables: please add autopkgtests (to add coverage for python3-numpy)
1087167 vitables: Python SyntaxWarning
xtensor (2) Homepage: https://github.com/xtensor-stack/xtensor Vcs Debian Science Maintainers
1053090 libxsimd-dev: arm64 error in xtensor: usage of batch type with unsupported type
1061243 needs update for xsimd 14 upstream
yade (2) Homepage: https://yade-dem.org/doc/ Vcs Debian Science Maintainers
1136335 yade: FTBFS with libeigen3-dev 5.0 (major version transition) forky, ftbfs, sid
1141213 yade: FTBFS: /usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:42:91: error: '<unnamed>.Eigen::Matrix<double, 3, 1, 0, 3, 1>::<unnamed>.Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::m_storage.Eigen::DenseStorage<double, 3, 3, 1, 0>::m_data.Eigen::internal::plain_array<double, 3, 0, 0>::array[2]' may be used uninitialized [-Werror=maybe-uninitialized] forky, ftbfs, sid
yorick (3) Homepage: http://yorick.sourceforge.net Vcs Debian Science Maintainers
580524 SIGFPE not catchable on MIPS without an FPU wontfix
918711 yorick-full makes all yorick RC buggy too easily
1105551 yorick: FTBFS with make --shuffle=reverse: make[1]: *** [Makefile:38: ../../build/doc/README.html] Error 1 shuffle=reverse forky, ftbfs, sid, trixie

Open bugs in suggested packages

2 serious, 7 important, 4 normal, 8 minor, 4 wishlist
calculix-ccx-test (1) Homepage: https://www.calculix.de Vcs Debian Science Maintainers
1117816 calculix-ccx-test: suggests calculix-ccx-doc which is not in unstable
lbfgspp (2) Homepage: https://github.com/yixuan/LBFGSpp Vcs Debian Science Maintainers
1119945 lbfgspp: No human maintainer
1136245 lbfgspp: FTBFS with libeigen3-dev 5.0 (major version transition) forky, ftbfs, sid
magma (1) Homepage: https://icl.cs.utk.edu/magma/ Vcs Debian Science Maintainers
1129598 magma: Should we have single src:magma for all instead of (auto) forked src:magma-rocm?
matlab-support (6) Homepage: Vcs Debian Science Maintainers
702637 matlab-support: fails to install in clean chroot wontfix
702658 matlab-support: uninteruptable prompt on installation with readline
702832 matlab-support: source in main even though it depends on non-free matlab wontfix
713938 set MATLABPATH to point to system-wide location
891632 matlab-support: dpkg-preconfigure with DEBIAN_FRONTEND=noninteractive can hang because of endless loop
1002486 matlab-support: endless loop during interactive install
metis-edf (2) Homepage: http://glaros.dtc.umn.edu/gkhome/metis/metis/overview Vcs Debian Science Team
792036 [libmetis-edf-dev] missing metis.h
1066955 metis-edf: FTBFS with -Werror=implicit-function-declaration forky, ftbfs, sid, trixie
neartree (1) Homepage: https://neartree.sourceforge.net/ Vcs Debian Science Maintainers
1097441 neartree: ftbfs with GCC-15 forky, ftbfs, sid
python-agate (1) Homepage: https://agate.readthedocs.org/ Vcs Debian Python Team
1138117 Updating the python-agate Uploaders list
python-agate-dbf (1) Homepage: https://agate-dbf.rtfd.org/ Vcs Debian Python Team
1138118 Updating the python-agate-dbf Uploaders list
python-agate-excel (1) Homepage: https://agate-excel.readthedocs.io/ Vcs Debian Python Team
1138119 Updating the python-agate-excel Uploaders list
python-agate-sql (1) Homepage: https://agate-sql.rtfd.org/ Vcs Debian Python Team
1138120 Updating the python-agate-sql Uploaders list
python-dbfread (1) Homepage: https://dbfread.readthedocs.org/ Vcs Debian Python Team
1138125 Updating the python-dbfread Uploaders list
python-leather (1) Homepage: https://leather.readthedocs.org/ Vcs Debian Python Team
1138134 Updating the python-leather Uploaders list
python-threadpoolctl (1) Homepage: https://github.com/joblib/threadpoolctl Vcs Debian Science Maintainers
1001578 Missing egg-info folder
spyder-kernels (3) Homepage: https://github.com/spyder-ide/spyder-kernels Vcs Debian Science Maintainers
1028430 spyder-kernels: flaky autopkgtest: test_dask_multiprocessing AssertionError
1123355 spyder-kernels: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" returned exit code 13 forky, ftbfs, sid
1125276 spyder-kernels: upper bound conflicts with ipykernel fixed-upstream
spyder-line-profiler (1) Homepage: https://github.com/spyder-ide/spyder-line-profiler Vcs Debian Science Maintainers
1138154 Updating the spyder-line-profiler Uploaders list
spyder-unittest (1) Homepage: https://github.com/spyder-ide/spyder-unittest Vcs Debian Science Maintainers
1138155 Updating the spyder-unittest Uploaders list

Done bugs

liggghts (1) Homepage: https://www.liggghts.com/ Vcs Debian Science Maintainers
1140929 FTBFS with vtk 9.6 ftbfs, patch
numcodecs (1) Homepage: https://github.com/zarr-developers/numcodecs Vcs Debian Science Maintainers
1140864 numcodecs: autopkgtest regression with pytest 9.1 forky, ftbfs, sid
numpy (4) Homepage: https://www.numpy.org/ Vcs Debian Python Team
1087777 python-numpy-doc: Broken style
1139196 src:numpy: fails to migrate to testing for too long forky, sid
1140993 numpy: FTBFS: E pytest.PytestRemovedIn10Warning: Passing a non-Collection iterable to parametrize is deprecated. forky, ftbfs, sid
1142428 _multiarray_umath.cpython-314-x86_64-linux-gnu.so requires SSE4.1 (pinsrq) on amd64
python-escript (1) Homepage: https://github.com/esys-escript/esys-escript.github.io Vcs Debian Science Maintainers
1122465 python-escript: FTBFS: dh_install: error: missing files, aborting forky, ftbfs, sid
scilab (1) Homepage: https://www.scilab.org Vcs Debian Science Maintainers
1106083 scilab: FTBFS: autobuilder hangs when using the kernel of trixie bookworm, forky, ftbfs, help, sid, trixie
scipy (1) Homepage: https://www.scipy.org/ Vcs Debian Python Team
1046493 scipy: Fails to build source after successful build ftbfs, sid, trixie
spyder (1) Homepage: https://github.com/spyder-ide/spyder Vcs Debian Science Maintainers
1138153 Updating the spyder Uploaders list
toon (1) Homepage: https://www.edwardrosten.com/cvd/toon.html Vcs Debian Science Maintainers
1047170 toon: Fails to build source after successful build forky, ftbfs, sid, trixie
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Sat, 25 Jul 2026 18:17:53 -0000