Summary

Bugs of task analytical-biochemistry

Total bugs: 22

Open bugs: 22

Fixed bugs: 0

Links to other tasks

Tasks overview

Analytical biochemistry 22 (305)

Cheminformatics 21 (216)

Crystallography 8 (138)

C/c++/fortran development 35 (393)

Input preparation and output processing 11 (174)

Molecular ab initio calculations 26 (372)

Molecular dynamics 21 (291)

Molecular modelling 14 (228)

Periodic ab initio calculations 20 (264)

Semi empirical calculations 5 (54)

Chemical formula/structure editors 10 (93)

3d visualization 19 (276)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	6	3
important	2	1
normal	5	1
minor	4	0
wishlist	0	0

Summary bugs page of task Analytical biochemistry

Immediately looking into bugs of the dependencies of this task is advised (305)^*

Open bugs in dependent packages

6 serious, 2 important, 5 normal, 4 minor

freesasa (1) Homepage: https://freesasa.github.io Vcs Debichem Team
1114110	freesasa: FTBFS: cif.cc:294:51: error: 'const __gnu_cxx::__alloc_traits<std::allocator<gemmi::Model>, gemmi::Model>::value_type' {aka 'const struct gemmi::Model'} has no member named 'name'	forky, ftbfs, sid
libmstoolkit (3) Homepage: https://github.com/mhoopmann/mstoolkit Vcs The Debichem Group
1046863	libmstoolkit: Fails to build source after successful build	forky, ftbfs, sid, trixie
1105536	libmstoolkit: FTBFS with make --shuffle=reverse: ar: mzp.MSNumpress.o: No such file or directory	forky, ftbfs, sid, trixie
1113857	libmstoolkit FTCBFS: builds for the build architecture	patch
libpwiz (1) Homepage: http://proteowizard.sourceforge.net/downloads.shtml Vcs The Debichem Group
1110624	libpwiz ftbfs with boost 1.88	forky, sid
massxpert (2) Homepage: http://www.msxpertsuite.org/ Vcs The Debichem Group
1045227	massxpert: Fails to build source after successful build	forky, ftbfs, sid, trixie
1084296	massxpert: FTBFS: rror: static assertion failed: No Q_OBJECT in the class passed to QObject::findChildren	forky, ftbfs, sid, trixie
openms (3) Homepage: http://www.openms.de Vcs The Debichem Group
1068052	openms: FTBFS on armel,armhf (error: âQOpenGLFunctions_2_0â does not name a type)	ftbfs
1112634	openms FTBFS: error from pdflatex	forky, ftbfs, pending, sid
1113360	openms: FTBFS with CMake 4	forky, ftbfs, sid
python-pymzml (3) Homepage: https://github.com/pymzml/pymzML Vcs The Debichem Group
1035209	python-pymzml: please add autopkgtests (to add coverage for python3-numpy)
1086925	python-pymzml: Python SyntaxWarning
1092544	python-pymzml: FTBFS: mv: cannot stat 'debian/python3-pymzml/usr/lib/python3.13/dist-packages/test.dat.igzip': No such file or directory	forky, ftbfs, sid, trixie
toppic (4) Homepage: http://proteomics.informatics.iupui.edu/software/toppic/index.html Vcs The Debichem Group
1046582	toppic: Fails to build source after successful build	forky, ftbfs, sid, trixie
1088440	toppic: move from twitter-bootstrap{3,4} to bootstrap-html (v5)	upstream
1088603	toppic-common: move from twitter-bootstrap{3,4} to bootstrap-html (v5)	upstream
1113580	toppic: FTBFS with CMake 4	forky, ftbfs, sid

Open bugs in suggested packages

3 serious, 1 important, 1 normal

isospec (3) Homepage: https://github.com/MatteoLacki/IsoSpec Vcs The Debichem Group
1085652	isospec: Python SyntaxWarning
1113056	isospec: FTBFS with CMake 4	forky, ftbfs, sid
1114157	isospec: FTBFS: dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j2 "INSTALL=install --strip-program=true" pdf_doc VERBOSE=1 returned exit code 2	forky, ftbfs, sid
libpwizlite (2) Homepage: https://salsa.debian.org/debichem-team/libpwizlite Vcs The Debichem Group
1110632	libpwizlite ftbfs with boost 1.88	forky, sid
1115146	toppic: FTBFS: error: redefinition of 'std::string boost::filesystem::extension(const path&)'	forky, ftbfs, sid

Done bugs

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0