PAN Blend Project
Summary
data-reduction-frameworks
photons-and-neutrons data reduction frameworks

This metapackage will install X-ray photons-and-neutrons PAN frameworks dedicated to the data reduction

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for PAN Blend to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the PAN Blend mailing list

Links to other tasks

PAN Blend data-reduction-frameworks packages

Official Debian packages with high relevance

admesh
??? missing short description for package admesh :-(
Versions of package admesh
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bookworm0.98.4-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
sid0.98.5-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
forky0.98.5-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bullseye0.98.4-1amd64,arm64,armhf,i386
trixie0.98.5-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
Debtags of package admesh:
fieldmathematics
interfacecommandline
roleprogram
scopeutility
works-with3dmodel
works-with-formatvrml
Popcon: 15 users (80 upd.)*
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License: DFSG free
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Screenshots of package admesh
bcolz-doc
??? missing short description for package bcolz-doc :-(
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bullseye1.2.1+ds2-7all
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bitshuffle
??? missing short description for package bitshuffle :-(
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bookworm0.3.5-4amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye0.3.5-3.1amd64,arm64,armhf,i386
trixie0.5.2-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
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clpeak
??? missing short description for package clpeak :-(
Versions of package clpeak
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trixie1.1.3-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
forky1.1.5-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bookworm1.1.2-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
upstream2.1.4
Popcon: 18 users (10 upd.)*
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fityk
??? missing short description for package fityk :-(
Versions of package fityk
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bullseye1.3.1-6amd64,arm64,armhf,i386
bookworm1.3.2-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.3.2-3amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
sid1.3.2-3amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
Debtags of package fityk:
fieldchemistry, physics
interfacex11
roleprogram
sciencecalculation, modelling, plotting
scopeutility
uitoolkitncurses, wxwidgets
x11application
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Please cite: M. Wojdyr: Fityk: a general-purpose peak fitting program. (eprint) J. Appl. Cryst. 43(5):1126-1128 (2010)
gnuplot
??? missing short description for package gnuplot :-(
Versions of package gnuplot
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sid6.0.3+dfsg1-1all
forky6.0.3+dfsg1-1all
bookworm5.4.4+dfsg1-2all
bullseye5.4.1+dfsg1-1+deb11u1all
upstream6.0.5-testing
Debtags of package gnuplot:
fieldmathematics
interfacecommandline
roledummy, metapackage
useconverting
works-withimage, image:vector
Popcon: 140 users (77 upd.)*
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Other screenshots of package gnuplot
VersionURL
4.2.4-1https://screenshots.debian.net/screenshot/gnuplot/1227
Screenshots of package gnuplot
grads
??? missing short description for package grads :-(
Versions of package grads
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bullseye2.2.1-4amd64,arm64,armhf,i386
trixie2.2.1-9amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm2.2.1-5amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
forky2.2.1-12amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
sid2.2.1-12amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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works-withimage
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h5utils
??? missing short description for package h5utils :-(
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sid1.13.3-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
forky1.13.2-2amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bookworm1.13.2-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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hdf-compass
??? missing short description for package hdf-compass :-(
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bullseye0.7~b8-3all
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Screenshots of package hdf-compass
hdf5-filter-plugin
??? missing short description for package hdf5-filter-plugin :-(
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sid0.0~git20221111.49e3b65-7amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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bookworm0.0~git20221111.49e3b65-4amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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hdf5-filter-plugin-blosc-serial
??? missing short description for package hdf5-filter-plugin-blosc-serial :-(
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forky1.0.1-2amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bookworm0.0~git20220616.9683f7d-5amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
sid1.0.1-2amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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hdf5-filter-plugin-zfp-serial
??? missing short description for package hdf5-filter-plugin-zfp-serial :-(
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bookworm1.1.0+git20221021-4amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el
sid1.1.1-3amd64,arm64,armhf,i386,loong64,ppc64el,riscv64
forky1.1.1-3amd64,arm64,armhf,i386,loong64,ppc64el,riscv64
trixie1.1.1-2amd64,arm64,armel,armhf,i386,ppc64el,riscv64
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hdf5-plugin-lzf
??? missing short description for package hdf5-plugin-lzf :-(
Versions of package hdf5-plugin-lzf
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trixie3.13.0-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm3.7.0-8amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
sid3.16.0-6amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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hdf5-tools
??? missing short description for package hdf5-tools :-(
Maintainer: Gilles Filippini
Versions of package hdf5-tools
ReleaseVersionArchitectures
sid2.2.0+repack-4amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bullseye1.10.6+repack-4+deb11u1amd64,arm64,armhf,i386
bookworm1.10.8+repack1-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.14.5+repack-3amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
forky2.2.0+repack-4amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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interfacecommandline
roledocumentation, program
scopeutility
useconverting
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imagej
??? missing short description for package imagej :-(
Versions of package imagej
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bullseye1.53g-2all
bookworm1.53t-1all
sid1.54g-1all
trixie1.54g-1all
forky1.54g-1all
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roleprogram
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works-withimage, image:raster
works-with-formatgif, jpg, tiff
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Please cite: Caroline A Schneider, Wayne S Rasband and Kevin W Eliceiri: NIH Image to ImageJ: 25 years of image analysis. (PubMed,eprint) Nature methods 9:671-675 (2012)
Registry entries: SciCrunch 
Screenshots of package imagej
jupyter-notebook
??? missing short description for package jupyter-notebook :-(
Versions of package jupyter-notebook
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sid7.4.7-3all
bullseye6.2.0-1all
bookworm6.4.12-2.2all
trixie6.4.13-5all
forky7.4.7-3all
upstream7.7.0a1
Popcon: 295 users (187 upd.)*
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jupyterlab
??? missing short description for package jupyterlab :-(
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sid4.4.10+ds1+~3.1.0+~0.16.6+~cs1.4.4-5all
forky4.4.10+ds1+~3.1.0+~0.16.6+~cs1.4.4-5all
trixie4.0.11+ds1+~cs11.25.27-7all
upstream4.7.0a1+~4.1.1+~0.17.1+~cs1.4.4
Popcon: 76 users (157 upd.)*
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The package is enhanced by the following packages: python3-jupyterlab-widgets
labplot
??? missing short description for package labplot :-(
Versions of package labplot
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bullseye2.8.1-2amd64,arm64,armhf,i386
bookworm2.9.0-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie2.12.0-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
sid2.12.1-5amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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libxrl-dev
??? missing short description for package libxrl-dev :-(
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bookworm4.0.0+dfsg1-3amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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sid4.3.0+dfsg-1amd64,arm64,armhf,i386,loong64,ppc64el,s390x
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libxrl11
??? missing short description for package libxrl11 :-(
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sid4.2.1+dfsg-3riscv64
sid4.3.0+dfsg-1amd64,arm64,armhf,i386,loong64,ppc64el,s390x
bookworm4.0.0+dfsg1-3amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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libxy-bin
??? missing short description for package libxy-bin :-(
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sid1.6-3.1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
forky1.6-3.1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
trixie1.6-3.1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm1.6-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bullseye1.6-1amd64,arm64,armhf,i386
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roleprogram
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looktxt
??? missing short description for package looktxt :-(
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bookworm1.4.1-3amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.4.1-3amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
sid1.4.1-3amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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lz4
??? missing short description for package lz4 :-(
Maintainer: Nobuhiro Iwamatsu
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trixie1.10.0-4amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
sid1.10.0-10amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
bullseye1.9.3-2amd64,arm64,armhf,i386
bookworm1.9.4-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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ngraph-gtk
??? missing short description for package ngraph-gtk :-(
Maintainer: Hiroyuki Ito
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forky6.09.11-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
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trixie6.09.09-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm6.09.07-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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octave
??? missing short description for package octave :-(
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forky11.3.0-1amd64,arm64,armhf,i386,loong64,ppc64el,riscv64,s390x
trixie9.4.0-1amd64,arm64,armel,armhf,i386,ppc64el,riscv64,s390x
bookworm7.3.0-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
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The package is enhanced by the following packages: liboctave-dev octave-dev octave-doc texmacs-bin
Please cite: John W. Eaton, David Bateman, Søren Hauberg and Rik Wehbring: GNU Octave version 4.2.0 manual: a high-level interactive language for numerical computations. (2016)
Registry entries: SciCrunch 
pandoc
??? missing short description for package pandoc :-(
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The package is enhanced by the following packages: libpandoc-elements-perl pandoc-sidenote
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pymca
??? missing short description for package pymca :-(
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python-agate-doc
??? missing short description for package python-agate-doc :-(
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python-dask-doc
??? missing short description for package python-dask-doc :-(
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python-ipywidgets-doc
??? missing short description for package python-ipywidgets-doc :-(
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python-mpi4py-doc
??? missing short description for package python-mpi4py-doc :-(
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roledocumentation
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python-skbio-doc
??? missing short description for package python-skbio-doc :-(
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Registry entries: Bioconda 
python-skimage-doc
??? missing short description for package python-skimage-doc :-(
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Please cite: Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu and the scikit-image contributors: scikit-image: Image processing in Python (eprint) PeerJ 2:e453 (2014)
python-sklearn-doc
??? missing short description for package python-sklearn-doc :-(
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develdoc, lang:python
roledocumentation
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Registry entries: Bio.tools  SciCrunch 
python-tables-doc
??? missing short description for package python-tables-doc :-(
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bookworm3.7.0-5all
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Screenshots of package python3-mpltoolkits.basemap
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python3-opencv
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Please cite: Gary Bradski and Adrian Kaehler: Learning OpenCV: Computer Vision with the OpenCV Library (2008)
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The package is enhanced by the following packages: python3-bottleneck python3-sklearn-pandas
Please cite: McKinney, Wes: pandas: a Foundational Python Library for Data Analysis and Statistics (eprint) (2011)
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python3-seaborn
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python3-skbio
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Please cite: Stéfan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu and the scikit-image contributors: scikit-image: Image processing in Python (eprint) PeerJ 2:e453 (2014)
python3-sklearn
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The package is enhanced by the following packages: python3-sklearn-compat python3-sklearn-pandas
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python3-tables
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python3-tifffile
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python3-traitlets
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python3-xarray
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python3-xraydb
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python3-zarr
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qemu-web-desktop
??? missing short description for package qemu-web-desktop :-(
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scilab
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The package is enhanced by the following packages: texmacs-bin
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silx
??? missing short description for package silx :-(
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spyder3
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texlive-science
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2025.20260124https://screenshots.debian.net/screenshot/texlive-science/29133
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view3dscene
??? missing short description for package view3dscene :-(
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vistrails
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vitables
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xmaxima
??? missing short description for package xmaxima :-(
Maintainer: Camm Maguire
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xpython
??? missing short description for package xpython :-(
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zstd
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The package is enhanced by the following packages: zutils

Packaging has started and developers might try the packaging code in VCS

python3-codraft
Signal and image processing software
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Version: 2.2.1-3

CodraFT is a generic signal and image processing software based on Python scientific libraries (such as NumPy, SciPy or scikit-image) and Qt graphical user interfaces (thanks to guidata and guiqwt.

CodraFT stands for "CODRA Filtering Tool".

CodraFT is available as a stand-alone application or as an addon to your Python-Qt application thanks to advanced automation and embedding features.

python3-mpld3
D3 viewer for matplotlib
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Version: 0.3git+20140910dfsg-4

mpld3 brings together Matplotlib, the popular Python-based graphing library, and D3js, the popular Javascript library for creating interactive data visualizations for the web. The result is a simple API for exporting your matplotlib graphics to HTML code which can be used within the browser, within standard web pages, blogs, or tools such as the IPython notebook.

This package provides the Python 3.x module.

No known packages available but some record of interest (WNPP bug)

thredds - wnpp
The THREDDS Data Server (TDS) is a web server that
License: MIT
Debian package not available

provides metadata and data access for scientific datasets, using OPeNDAP, OGC WMS and WCS, HTTP, and other remote data access protocols.

No known packages available

dawn
general purpose data acquisition and processing
License: ?
Debian package not available
disp
Diffraction Image Statistics Package for R
License: GPL2+
Debian package not available

This R package provides functions that simulate the operation of a CCD area detector of the type commonly used in macromolecular X-ray crystallography. In addition to the simulation, functions allowing display, integration and statistical analysis of diffraction spot images are also included.

DISP was written to investigate possible improvements to error estimation for diffraction spot integration of data recorded on CCD detectors. That work was published in Waterman & Evans. Estimation of errors in diffraction data measured by CCD area detectors. Journal of Applied Crystallography 43(6), 2010.

edna
Framework to build online data analysis programs
License: GPL3+ LGPL3+
Debian package not available
graphlab
A New Parallel Framework for Machine Learning
License: Apache License
Debian package not available
gumtree
general purpose data acq and processing
License: ?
Debian package not available
mantid
?
License: ?
Debian package not available
nexpy
A Python GUI to analyze NeXus data
License: LGPL
Debian package not available

NeXpy is designed to provide an intuitive interactive toolbox allowing users both to access existing NeXus files and to create new NeXus-conforming data structures without expert knowledge of the file format.

*Popularitycontest results: number of people who use this package regularly (number of people who upgraded this package recently) out of 287332