Bugs page
This is a list of metapackages. The links are leading to the respective bugs page.
- Biology - Debian Med bioinformatics packages (2000*)
- This metapackage will install Debian packages for use in molecular biology,
structural biology and other biological sciences.
- Biology development - Debian Med packages for development of bioinformatics applications (1082*)
- This metapackage will install Debian packages which might be helpful
for development of applications for biological research.
- Next generation sequencing - Debian Med bioinformatics applications usable in Next Generation Sequencing (42*)
- It aims at gettting packages which specialize in the processing or interpretation of
data generated with next- (and later-) generation high-thoughput sequencing technologies.
- Phylogeny - Debian Med phylogeny packages (48*)
- This lists Debian packages related to phylogeny for use in life sciences.
The purpose of this compilation of packages is to have a handy subset of
from the med-bio metapackage which contains a lot more than only phylogeny
related software.
- Cloud - Debian Med bioinformatics applications usable in cloud computing (477*)
- This metapackage will install Debian packages related to molecular biology,
structural biology and bioinformatics for use in life sciences, that do not
depend on graphical toolkits and therefore can fit on system images for use
in cloud computing clusters, where space can be limited.
- Content management - Debian Med content management systems (0*)
- Here you can find software that is useful to build a
content management system for medical care.
- Covid-19 - This task exists only for tagging COVID-19 relevant cases (1635*)
- The Debian Med team intends to take part at the
COVID-19 Biohackathon (April 5-11, 2020)
This task was created only for the purpose to list relevant packages.
- Medical data - Debian Med drug databases (0*)
- This metapackage will install free drug databases and related
applications. The database can be accessed by any EMR using
the application.
- Dental - Debian Med packages related to dental practice (12*)
- This metapackage contains dependencies for a collection of software
which might be helpful for dentists to manage their practice.
- Epidemiology - Debian Med epidemiology related packages (162*)
- This metapackage will install tools that are useful in epidemiological
research. Several packages making use of the GNU R data language for
statistical investigation. It might be a good idea to read the paper
"A short introduction to R for Epidemiology" at
http://staff.pubhealth.ku.dk/%7Ebxc/Epi/R-intro.pdf
- Hospital information systems - Debian Med suggestions for Hospital Information Systems (9*)
- This metapackage contains dependencies for software and that could
be useful ro run a Hospital Information System. While there is
continuous work going on to package a ready to install system currently
only preconditions are finished but hopefully helpful in hospitals
anyway.
- Imaging - Debian Med image processing and visualization packages (776*)
- This metapackage will install Debian packages which might be useful in
medical image processing and visualization.
.
On one hand, it installs several packages supporting various image file
formats and image management, like DICOM (Digital Imaging and
Communications in Medicine) which is the de-facto standard for medical
image management, and NIFTI. On the other hand, it provides a variety of
software packages that can be used for visualization and for image processing
- either from a graphical user interface, the command line, or implemented in
workflows.
- Imaging development - Debian Med image processing and visualization packages development (501*)
- This metapackage will install Debian packages which might be useful
for developing applications for medical image processing and
visualization.
- Laboratory - Debian Med suggestions for medical laboratories (9*)
- This metapackage contains dependencies for software and that could
be useful ro run a medical laboratory.
- Oncology - Debian Med packages for oncology (3*)
- This metapackage will install tools that are useful for radiation
oncology.
- Pharmacology - Debian Med packages for pharmaceutical research (9*)
- This metapackage contains dependencies for a
collection of software and documentation which is useful for
pharmaceutical research.
- Physics - Debian Med packages for medical physicists (192*)
- This metapackage contains dependencies for a
collection of software and documentation which is useful for
medical physicists in radiation oncology, diagnostics imaging
and related fields.
- Practice - Debian Med packages for practice management (48*)
- This metapackage contains dependencies for a collection of software
which might be helpful for practitioners to manage their practice.
- Psychology - Debian Med packages for psychology (133*)
- This metapackage contains dependencies for a collection of software
which might be helpful for psychological research.
- Rehabilitation - Debian Med packages for rehabilitation technologies (0*)
- This metapackage will install tools that are useful for
rehabilitation and therapy.
- Research - Debian Med packages for medical research (0*)
- This metapackage will install tools that are useful for
medical research.
- Statistics - Debian Med statistics (16*)
- This metapackage will install packages which are helpful to do statistics
with a special focus on tasks in medical care.
- Tools - Debian Med several tools (230*)
- This metapackage will install tools for several purposes in health care.
Currently it contains some simple programs for Personal Health.
- Typesetting - Debian Med support for typesetting and publishing (540*)
- This metapackage will install Debian packages that might be helpful
for typesetting and publishing in medical care and structural
biology.
